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KEGG Mapper: Color Objects in KEGG Pathways

KEGG Mapper Search Pathway Color Pathway Search Brite Color Brite Join Brite

Search against:

Enter objects one per line followed by bgcolor, fgcolor:
Examples:

(Reference pathway (KO))
K01803 red,blue
C00118 pink

(Homo sapiens pathway)
7167 red,blue
C00118 pink
Alternatively, enter the file name containing the data:
If necessary, change default bgcolor:

Include aliases

Use uncolored diagrams

Display objects not found in the search


Color Pathway is a modified pathway mapping tool, where given objects (genes, proteins, compounds, glycans, reactions, drugs, etc.) are searched against KEGG pathway maps and found objects are marked in any background and foreground colors (bgcolor and fgcolor). The objects in different types of pathway maps are specified by the following KEGG identifiers and aliases.

Prefix Type KEGG identifier Alias
map Reference pathway - metabolic K/R/EC numbers, C/G/D numbers KO alias
map Reference pathway - non-metabolic K number, C/G/D numbers KO alias
ko Reference pathway (KO) K number, C/G/D numbers KO alias
ec Reference pathway (EC) EC number, C/G/D numbers
rn Reference pathway (Reaction) R number, C/G/D numbers RP/RC numbers
org Organism-specific pathway gene identifier, C/G/D numbers gene alias (gene name),
K/EC numbers

Last updated: September 1, 2010
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