Naphthalene and anthracene degradation - Reference pathway

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Reference pathway Reference pathway (KO) Reference pathway (EC) Reference pathway (Reaction) -----< Sort below by alphabet >----- Canis familiaris (dog) Danio rerio (zebrafish) Nematostella vectensis (sea anemone) Drosophila melanogaster (fruit fly) Drosophila pseudoobscura pseudoobscura Caenorhabditis elegans (nematode) Arabidopsis thaliana (thale cress) Oryza sativa japonica (Japanese rice) Ostreococcus lucimarinus Cyanidioschyzon merolae Kluyveromyces lactis Debaryomyces hansenii Pichia stipitis Schizosaccharomyces pombe Magnaporthe grisea Aspergillus nidulans Aspergillus fumigatus Aspergillus oryzae Aspergillus niger Cryptococcus neoformans JEC21 Ustilago maydis Dictyostelium discoideum Tetrahymena thermophila Trypanosoma brucei Trypanosoma cruzi Leishmania major Entamoeba histolytica Trichomonas vaginalis Escherichia coli K-12 MG1655 Escherichia coli K-12 W3110 Escherichia coli O157 EDL933 (EHEC) Escherichia coli O157 Sakai (EHEC) Salmonella enterica subsp. enterica serovar Typhi CT18 Salmonella enterica subsp. enterica serovar Typhi Ty2 Salmonella enterica subsp. enterica serovar Paratyphi A Salmonella enterica subsp. enterica serovar Paratyphi B Salmonella enterica subsp. enterica serovar Choleraesuis Salmonella typhimurium LT2 Shigella flexneri 8401 (serotype 5b) Photorhabdus luminescens Sodalis glossinidius Citrobacter koseri ATCC BAA-895 Serratia proteamaculans Haemophilus somnus 129PT Xylella fastidiosa 9a5c Xylella fastidiosa Temecula1 Xanthomonas campestris pv. campestris ATCC 33913 Xanthomonas campestris pv. campestris 8004 Xanthomonas campestris pv. campestris B100 Xanthomonas campestris pv. vesicatoria Xanthomonas axonopodis Xanthomonas oryzae KACC10331 Xanthomonas oryzae MAFF311018 Vibrio fischeri Photobacterium profundum Pseudomonas aeruginosa PAO1 Pseudomonas putida KT2440 Pseudomonas putida F1 Pseudomonas syringae pv. phaseolicola 1448A Pseudomonas fluorescens Pf0-1 Pseudomonas entomophila Psychrobacter arcticum Psychrobacter cryohalolentis Acinetobacter sp. ADP1 Acinetobacter baumannii SDF Acinetobacter baumannii AYE Shewanella oneidensis Shewanella denitrificans Shewanella frigidimarina Shewanella amazonensis Shewanella baltica OS155 Shewanella loihica Shewanella putrefaciens Shewanella sediminis Shewanella sp. MR-4 Shewanella sp. ANA-3 Idiomarina loihiensis Colwellia psychrerythraea Pseudoalteromonas atlantica Marinobacter aquaeolei Psychromonas ingrahamii Coxiella burnetii RSA 493 Legionella pneumophila Philadelphia 1 Legionella pneumophila Lens Legionella pneumophila Paris Legionella pneumophila Corby Methylococcus capsulatus Francisella tularensis subsp. tularensis SCHU S4 Francisella tularensis subsp. tularensis FSC 198 Francisella tularensis subsp. tularensis WY96-3418 Francisella tularensis subsp. holarctica LVS Francisella tularensis subsp. holarctica OSU18 Francisella tularensis subsp. novicida U112 Thiomicrospira crunogena Hahella chejuensis Alcanivorax borkumensis Chromobacterium violaceum Ralstonia solanacearum Ralstonia eutropha JMP134 Ralstonia eutropha H16 Ralstonia metallidurans Burkholderia mallei ATCC 23344 Burkholderia mallei SAVP1 Burkholderia mallei NCTC 10229 Burkholderia mallei NCTC 10247 Burkholderia xenovorans Burkholderia sp. 383 Burkholderia cenocepacia AU1054 Burkholderia cenocepacia HI2424 Burkholderia cepacia Burkholderia multivorans ATCC 17616 (JGI) Burkholderia pseudomallei K96243 Burkholderia pseudomallei 1710b Burkholderia pseudomallei 1106a Burkholderia pseudomallei 668 Burkholderia thailandensis Bordetella pertussis Bordetella parapertussis Bordetella bronchiseptica Rhodoferax ferrireducens Polaromonas sp. JS666 Polaromonas naphthalenivorans Acidovorax avenae Acidovorax sp. JS42 Verminephrobacter eiseniae Methylibium petroleiphilum Azoarcus sp. EbN1 Azoarcus sp. BH72 Dechloromonas aromatica Thiobacillus denitrificans Methylobacillus flagellatus Campylobacter fetus Geobacter sulfurreducens Geobacter uraniumreducens Pelobacter carbinolicus Desulfovibrio vulgaris Hildenborough Desulfovibrio vulgaris DP4 Desulfovibrio desulfuricans Bdellovibrio bacteriovorus Anaplasma phagocytophilum Ehrlichia chaffeensis Candidatus Pelagibacter ubique Mesorhizobium loti Mesorhizobium sp. BNC1 Sinorhizobium meliloti Agrobacterium tumefaciens C58 (UWash/Dupont) Agrobacterium tumefaciens C58 (Cereon) Rhizobium etli CFN 42 Rhizobium leguminosarum Brucella melitensis 16M Brucella melitensis biovar Abortus Brucella abortus 9-941 Brucella suis 1330 Brucella ovis Bradyrhizobium japonicum Bradyrhizobium sp. ORS278 Bradyrhizobium sp. BTAi1 Rhodopseudomonas palustris CGA009 Rhodopseudomonas palustris HaA2 Rhodopseudomonas palustris BisB18 Rhodopseudomonas palustris BisB5 Rhodopseudomonas palustris BisA53 Nitrobacter winogradskyi Nitrobacter hamburgensis Bartonella henselae Bartonella quintana Bartonella bacilliformis Bartonella tribocorum Caulobacter crescentus Silicibacter pomeroyi Silicibacter sp. TM1040 Rhodobacter sphaeroides 2.4.1 Rhodobacter sphaeroides ATCC 17025 Jannaschia sp. CCS1 Roseobacter denitrificans Dinoroseobacter shibae Hyphomonas neptunium Novosphingobium aromaticivorans Erythrobacter litoralis Gluconobacter oxydans Acidiphilium cryptum JF-5 Magnetococcus sp. MC-1 Bacillus subtilis Bacillus anthracis Ames Bacillus anthracis Ames 0581 Bacillus anthracis A2012 Bacillus anthracis Sterne Bacillus cereus ATCC 14579 Bacillus cereus ATCC 10987 Bacillus cereus ZK Bacillus thuringiensis 97-27 Bacillus thuringiensis Al Hakam Bacillus licheniformis ATCC 14580 Bacillus licheniformis DSM13 Bacillus clausii Oceanobacillus iheyensis Staphylococcus aureus RF122 Staphylococcus aureus USA300 Staphylococcus epidermidis ATCC 12228 Staphylococcus epidermidis RP62A Staphylococcus saprophyticus Listeria monocytogenes EGD-e Listeria monocytogenes F2365 Listeria innocua Listeria welshimeri SLCC5334 Lactococcus lactis subsp. lactis IL1403 Lactococcus lactis subsp. cremoris SK11 Lactococcus lactis subsp. cremoris MG1363 Streptococcus pyogenes MGAS5005 (serotype M1) Streptococcus pyogenes MGAS10270 (serotype M3) Streptococcus pyogenes MGAS10750 (serotype M3) Streptococcus pyogenes MGAS2096 (serotype M3) Streptococcus pyogenes MGAS9429 (serotype M3) Streptococcus pyogenes MGAS10394 (serotype M6) Streptococcus pyogenes MGAS6180 (serotype M28) Lactobacillus sakei Lactobacillus salivarius Lactobacillus casei ATCC 334 Enterococcus faecalis Clostridium acetobutylicum Thermoanaerobacter tengcongensis Mycobacterium tuberculosis H37Rv Mycobacterium tuberculosis CDC1551 Mycobacterium tuberculosis H37Ra Mycobacterium bovis AF2122/97 Mycobacterium bovis BCG Pasteur 1173P2 Mycobacterium leprae Mycobacterium avium paratuberculosis Mycobacterium avium 104 Mycobacterium smegmatis Mycobacterium ulcerans Mycobacterium vanbaalenii Mycobacterium gilvum Mycobacterium sp. MCS Mycobacterium sp. KMS Mycobacterium sp. JLS Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) Corynebacterium glutamicum ATCC 13032 (Bielefeld) Corynebacterium glutamicum R Corynebacterium efficiens Corynebacterium jeikeium Nocardia farcinica Rhodococcus sp. RHA1 Streptomyces coelicolor Streptomyces avermitilis Arthrobacter aurescens Kocuria rhizophila Thermobifida fusca Frankia sp. CcI3 Frankia alni Saccharopolyspora erythraea Salinispora tropica Rhodopirellula baltica Synechocystis sp. PCC6803 Synechococcus elongatus PCC6301 Synechococcus elongatus PCC7942 Synechococcus sp. CC9605 Synechococcus sp. CC9902 Synechococcus sp. CC9311 Synechococcus sp. RCC307 Synechococcus sp. WH7803 Gloeobacter violaceus Anabaena sp. PCC7120 Anabaena variabilis Prochlorococcus marinus MED4 Prochlorococcus marinus MIT9313 Bacteroides thetaiotaomicron Bacteroides fragilis YCH46 Bacteroides fragilis NCTC9343 Porphyromonas gingivalis W83 Salinibacter ruber Cytophaga hutchinsonii Gramella forsetii Chlorobaculum tepidum Thermus thermophilus HB27 Methanosarcina mazei Haloarcula marismortui Haloquadratum walsbyi Natronomonas pharaonis Thermoplasma volcanium Sulfolobus tokodaii     Current selection