Polyketide sugar unit biosynthesis - Reference pathway

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Reference pathway (KO) Reference pathway (EC) Reference pathway (Reaction) -----< Sort below by alphabet >----- Tetraodon nigroviridis (green spotted puffer) Ciona intestinalis (sea squirt) Apis mellifera (honey bee) Caenorhabditis elegans (nematode) Caenorhabditis briggsae Populus trichocarpa (black cottonwood) Ostreococcus lucimarinus Ostreococcus tauri Fusarium graminearum Neosartorya fischeri Escherichia coli K-12 MG1655 Escherichia coli K-12 W3110 Escherichia coli K-12 DH10B Escherichia coli O157 EDL933 (EHEC) Escherichia coli O157 Sakai (EHEC) Escherichia coli O157 EC4115 (EHEC) Escherichia coli CFT073 (UPEC) Escherichia coli UTI89 (UPEC) Escherichia coli 536 (UPEC) Escherichia coli APEC O1 Escherichia coli E24377A Escherichia coli HS Escherichia coli SECEC Escherichia coli SE11 Escherichia coli ATCC 8739 Salmonella enterica subsp. enterica serovar Typhi CT18 Salmonella enterica subsp. enterica serovar Typhi Ty2 Salmonella enterica subsp. enterica serovar Paratyphi A Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601 Salmonella enterica subsp. enterica serovar Paratyphi B Salmonella enterica subsp. enterica serovar Choleraesuis Salmonella enterica subsp. enterica serovar Heidelberg Salmonella enterica subsp. enterica serovar Newport Salmonella enterica subsp. enterica serovar Schwarzengrund Salmonella enterica subsp. enterica serovar Agona Salmonella enterica subsp. enterica serovar Dublin Salmonella enterica subsp. enterica serovar Gallinarum Salmonella enterica subsp. enterica serovar Enteritidis Salmonella enterica subsp. arizonae Salmonella typhimurium LT2 Yersinia pestis CO92 Yersinia pestis KIM Yersinia pestis Mediaevails Yersinia pestis Antiqua Yersinia pestis Nepal516 Yersinia pestis Pestoides Yersinia pestis Angola Yersinia pseudotuberculosis IP32953 Yersinia pseudotuberculosis IP31758 Yersinia pseudotuberculosis YPIII Yersinia pseudotuberculosis PB1/+ Yersinia enterocolitica Shigella flexneri 301 (serotype 2a) Shigella flexneri 2457T (serotype 2a) Shigella flexneri 8401 (serotype 5b) Shigella sonnei Shigella boydii Sb227 Shigella boydii CDC 3083-94 Shigella dysenteriae Erwinia carotovora Erwinia tasmaniensis Photorhabdus luminescens Sodalis glossinidius Enterobacter sp. 638 Enterobacter sakazakii Klebsiella pneumoniae Klebsiella pneumoniae 342 Citrobacter koseri ATCC BAA-895 Serratia proteamaculans Proteus mirabilis Haemophilus ducreyi Actinobacillus pleuropneumoniae AP76 (serotype 7) Actinobacillus succinogenes Xylella fastidiosa 9a5c Xylella fastidiosa Temecula1 Xylella fastidiosa M12 Xylella fastidiosa M23 Xanthomonas campestris pv. campestris ATCC 33913 Xanthomonas campestris pv. campestris 8004 Xanthomonas campestris pv. campestris B100 Xanthomonas campestris pv. vesicatoria Xanthomonas axonopodis Xanthomonas oryzae KACC10331 Xanthomonas oryzae MAFF311018 Xanthomonas oryzae PXO99A Stenotrophomonas maltophilia Stenotrophomonas maltophilia R551-3 Vibrio vulnificus YJ016 Vibrio parahaemolyticus Vibrio fischeri Vibrio fischeri MJ11 Pseudomonas aeruginosa PAO1 Pseudomonas aeruginosa UCBPP-PA14 Pseudomonas aeruginosa PA7 Pseudomonas putida KT2440 Pseudomonas putida F1 Pseudomonas putida GB-1 Pseudomonas putida W619 Pseudomonas syringae pv. tomato DC3000 Pseudomonas syringae pv. syringae B728a Pseudomonas syringae pv. phaseolicola 1448A Pseudomonas fluorescens Pf-5 Pseudomonas fluorescens Pf0-1 Pseudomonas entomophila Pseudomonas mendocina Pseudomonas stutzeri Cellvibrio japonicus Psychrobacter arcticum Psychrobacter cryohalolentis Acinetobacter sp. ADP1 Shewanella oneidensis Shewanella denitrificans Shewanella frigidimarina Shewanella amazonensis Shewanella baltica OS155 Shewanella baltica OS185 Shewanella baltica OS195 Shewanella loihica Shewanella putrefaciens Shewanella sediminis Shewanella pealeana Shewanella sp. MR-4 Shewanella sp. MR-7 Shewanella sp. ANA-3 Shewanella sp. W3-18-1 Shewanella halifaxensis Shewanella woodyi ATCC51908 Idiomarina loihiensis Pseudoalteromonas atlantica Saccharophagus degradans Marinobacter aquaeolei Alteromonas macleodii Psychromonas ingrahamii Coxiella burnetii RSA 493 Coxiella burnetii RSA 331 Coxiella burnetii Dugway 5J108-111 Coxiella burnetii CbuG_Q212 Coxiella burnetii CbuK_Q154 Legionella pneumophila Philadelphia 1 Legionella pneumophila Lens Legionella pneumophila Paris Legionella pneumophila Corby Methylococcus capsulatus Francisella tularensis subsp. tularensis SCHU S4 Francisella tularensis subsp. tularensis FSC 198 Francisella tularensis subsp. tularensis WY96-3418 Francisella tularensis subsp. holarctica LVS Francisella tularensis subsp. holarctica OSU18 Francisella tularensis subsp. holarctica FTNF002-00 Francisella tularensis subsp. mediasiatica FSC147 Francisella philomiragia Thiomicrospira crunogena Nitrosococcus oceani Alkalilimnicola ehrlichei Hahella chejuensis Alcanivorax borkumensis Marinomonas sp. MWYL1 Aeromonas hydrophila Aeromonas salmonicida Acidithiobacillus ferrooxidans Neisseria meningitidis MC58 (serogroup B) Neisseria meningitidis Z2491 (serogroup A) Neisseria meningitidis FAM18 (serogroup C) Neisseria meningitidis 053442 (serogroup C) Neisseria gonorrhoeae Neisseria gonorrhoeae NCCP11945 Chromobacterium violaceum Ralstonia solanacearum Ralstonia pickettii Ralstonia eutropha JMP134 Ralstonia eutropha H16 Ralstonia metallidurans Burkholderia mallei ATCC 23344 Burkholderia mallei SAVP1 Burkholderia mallei NCTC 10229 Burkholderia mallei NCTC 10247 Burkholderia xenovorans Burkholderia vietnamiensis Burkholderia sp. 383 Burkholderia cenocepacia AU1054 Burkholderia cenocepacia HI2424 Burkholderia cenocepacia MC0-3 Burkholderia cenocepacia J2315 Burkholderia cepacia Burkholderia ambifaria MC40-6 Burkholderia multivorans ATCC 17616 (JGI) Burkholderia multivorans ATCC 17616 (Tohoku) Burkholderia pseudomallei K96243 Burkholderia pseudomallei 1710b Burkholderia pseudomallei 1106a Burkholderia pseudomallei 668 Burkholderia thailandensis Burkholderia phymatum Burkholderia phytofirmans Polynucleobacter sp. QLW-P1DMWA-1 Polynucleobacter necessarius Bordetella pertussis Bordetella parapertussis Bordetella bronchiseptica Bordetella petrii Bordetella avium Rhodoferax ferrireducens Polaromonas sp. JS666 Polaromonas naphthalenivorans Acidovorax avenae Acidovorax sp. JS42 Verminephrobacter eiseniae Delftia acidovorans Methylibium petroleiphilum Herminiimonas arsenicoxydans Minibacterium massiliensis Leptothrix cholodnii Nitrosomonas europaea Nitrosomonas eutropha Nitrosospira multiformis Azoarcus sp. EbN1 Azoarcus sp. BH72 Dechloromonas aromatica Thiobacillus denitrificans Methylobacillus flagellatus Helicobacter hepaticus Campylobacter jejuni NCTC11168 Campylobacter jejuni 81-176 Campylobacter jejuni 81116 Campylobacter curvus Arcobacter butzleri Sulfurovum sp. NBC37-1 Geobacter sulfurreducens Geobacter metallireducens Geobacter uraniumreducens Geobacter lovleyi Geobacter bemidjiensis Pelobacter carbinolicus Pelobacter propionicus Desulfovibrio vulgaris Hildenborough Desulfovibrio vulgaris DP4 Desulfovibrio desulfuricans Lawsonia intracellularis Bdellovibrio bacteriovorus Desulfotalea psychrophila Candidatus Desulfococcus oleovorans Anaeromyxobacter dehalogenans Anaeromyxobacter sp. K Myxococcus xanthus Sorangium cellulosum Syntrophus aciditrophicus Syntrophobacter fumaroxidans Mesorhizobium loti Mesorhizobium sp. BNC1 Parvibaculum lavamentivorans Sinorhizobium meliloti Sinorhizobium medicae Agrobacterium tumefaciens C58 (UWash/Dupont) Agrobacterium tumefaciens C58 (Cereon) Rhizobium etli CFN 42 Rhizobium etli CIAT 652 Rhizobium leguminosarum Rhizobium leguminosarum bv. trifolii WSM2304 Brucella melitensis 16M Brucella suis 1330 Brucella suis ATCC 23445 Brucella ovis Brucella canis Ochrobactrum anthropi Bradyrhizobium sp. ORS278 Bradyrhizobium sp. BTAi1 Rhodopseudomonas palustris CGA009 Rhodopseudomonas palustris HaA2 Rhodopseudomonas palustris BisB18 Rhodopseudomonas palustris BisB5 Rhodopseudomonas palustris BisA53 Rhodopseudomonas palustris TIE-1 Nitrobacter winogradskyi Nitrobacter hamburgensis Oligotropha carboxidovorans Xanthobacter autotrophicus Azorhizobium caulinodans Methylobacterium extorquens Methylobacterium radiotolerans Methylobacterium sp. 4-46 Methylobacterium populi Beijerinckia indica Caulobacter crescentus Caulobacter sp. K31 Phenylobacterium zucineum Silicibacter sp. TM1040 Rhodobacter sphaeroides 2.4.1 Rhodobacter sphaeroides ATCC 17029 Rhodobacter sphaeroides ATCC 17025 Jannaschia sp. CCS1 Roseobacter denitrificans Paracoccus denitrificans Dinoroseobacter shibae Maricaulis maris Hyphomonas neptunium Novosphingobium aromaticivorans Sphingomonas wittichii Gluconobacter oxydans Granulobacter bethesdensis Acidiphilium cryptum JF-5 Gluconacetobacter diazotrophicus Rhodospirillum rubrum Rhodospirillum centenum Magnetospirillum magneticum Magnetococcus sp. MC-1 Solibacter usitatus Bacillus subtilis Bacillus halodurans Bacillus anthracis Ames Bacillus anthracis Ames 0581 Bacillus anthracis A2012 Bacillus anthracis Sterne Bacillus cereus ATCC 14579 Bacillus cereus ATCC 10987 Bacillus cereus ZK Bacillus cereus subsp. cytotoxis NVH 391-98 Bacillus thuringiensis 97-27 Bacillus thuringiensis Al Hakam Bacillus weihenstephanensis Bacillus clausii Bacillus amyloliquefaciens Bacillus pumilus Oceanobacillus iheyensis Listeria monocytogenes EGD-e Lactococcus lactis subsp. lactis IL1403 Lactococcus lactis subsp. cremoris SK11 Lactococcus lactis subsp. cremoris MG1363 Streptococcus pyogenes SF370 (serotype M1) Streptococcus pyogenes MGAS5005 (serotype M1) Streptococcus pyogenes MGAS8232 (serotype M18) Streptococcus pyogenes MGAS315 (serotype M3) Streptococcus pyogenes SSI-1 (serotype M3) Streptococcus pyogenes MGAS10270 (serotype M3) Streptococcus pyogenes MGAS10750 (serotype M3) Streptococcus pyogenes MGAS2096 (serotype M3) Streptococcus pyogenes MGAS9429 (serotype M3) Streptococcus pyogenes Manfredo (serotype M5) Streptococcus pyogenes MGAS10394 (serotype M6) Streptococcus pyogenes MGAS6180 (serotype M28) Streptococcus pyogenes NZ131 (serotype M49) Streptococcus pneumoniae R6 Streptococcus pneumoniae D39 Streptococcus pneumoniae Hungary19A 6 Streptococcus pneumoniae G54 Streptococcus agalactiae 2603 (serotype V) Streptococcus agalactiae NEM316 (serotype III) Streptococcus agalactiae A909 (serotype Ia) Streptococcus mutans Streptococcus thermophilus CNRZ1066 Streptococcus thermophilus LMG18311 Streptococcus thermophilus LMD-9 Streptococcus sanguinis Streptococcus suis 05ZYH33 Streptococcus suis 98HAH33 Streptococcus gordonii Streptococcus equi Lactobacillus plantarum Lactobacillus johnsonii Lactobacillus salivarius Lactobacillus delbrueckii ATCC 11842 Lactobacillus delbrueckii ATCC BAA-365 Lactobacillus casei ATCC 334 Lactobacillus casei BL23 Lactobacillus gasseri Lactobacillus reuteri F275 (JGI) Lactobacillus reuteri F275 (Kitasato) Lactobacillus fermentum Enterococcus faecalis Oenococcus oeni Leuconostoc mesenteroides Leuconostoc citreum Clostridium acetobutylicum Clostridium perfringens 13 Clostridium perfringens ATCC 13124 Clostridium thermocellum Clostridium botulinum A ATCC 3502 Clostridium botulinum A ATCC 19397 Clostridium botulinum A Hall Clostridium botulinum A3 Loch Maree Clostridium botulinum B Eklund 17B Clostridium botulinum B1 Okra Clostridium botulinum E3 Clostridium botulinum F Langeland Clostridium beijerinckii Clostridium phytofermentans Carboxydothermus hydrogenoformans Desulfitobacterium hafniense Desulfotomaculum reducens Pelotomaculum thermopropionicum Candidatus Desulforudis audaxviator Thermoanaerobacter pseudethanolicus Moorella thermoacetica Mycobacterium tuberculosis H37Rv Mycobacterium tuberculosis CDC1551 Mycobacterium tuberculosis H37Ra Mycobacterium tuberculosis F11 Mycobacterium bovis AF2122/97 Mycobacterium bovis BCG Pasteur 1173P2 Mycobacterium leprae Mycobacterium avium paratuberculosis Mycobacterium avium 104 Mycobacterium smegmatis Mycobacterium ulcerans Mycobacterium vanbaalenii Mycobacterium gilvum Mycobacterium abscessus ATCC 19977T Mycobacterium sp. MCS Mycobacterium sp. KMS Mycobacterium sp. JLS Mycobacterium marinum M Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) Corynebacterium glutamicum ATCC 13032 (Bielefeld) Corynebacterium glutamicum R Corynebacterium efficiens Corynebacterium diphtheriae Corynebacterium jeikeium Corynebacterium urealyticum Nocardia farcinica Rhodococcus sp. RHA1 Streptomyces coelicolor Streptomyces avermitilis Streptomyces griseus Tropheryma whipplei Twist Tropheryma whipplei TW08/27 Leifsonia xyli xyli CTCB07 Clavibacter michiganensis subsp. michiganensis Clavibacter michiganensis subsp. sepedonicus Arthrobacter aurescens Kocuria rhizophila Frankia sp. CcI3 Frankia sp. EAN1pec Frankia alni Acidothermus cellulolyticus Saccharopolyspora erythraea Salinispora tropica Salinispora arenicola Bifidobacterium longum NCC2705 Bifidobacterium longum DJO10A Bifidobacterium adolescentis Rubrobacter xylanophilus Fusobacterium nucleatum Rhodopirellula baltica Opitutus terrae Methylacidiphilum infernorum Akkermansia muciniphila Candidatus Protochlamydia amoebophila Treponema denticola Leptospira interrogans serovar lai Leptospira interrogans serovar Copenhageni Leptospira borgpetersenii JB197 Leptospira borgpetersenii L550 Leptospira biflexa serovar Patoc Patoc 1 (Paris) Leptospira biflexa serovar Patoc Patoc 1 (Ames) Synechocystis sp. PCC6803 Synechococcus sp. WH8102 Synechococcus elongatus PCC6301 Synechococcus elongatus PCC7942 Synechococcus sp. CC9605 Synechococcus sp. CC9902 Synechococcus sp. RCC307 Synechococcus sp. WH7803 Thermosynechococcus elongatus Microcystis aeruginosa Cyanothece sp. ATCC 51142 Gloeobacter violaceus Anabaena sp. PCC7120 Nostoc punctiforme Anabaena variabilis Prochlorococcus marinus MED4 Prochlorococcus marinus MIT9313 Prochlorococcus marinus NATL2A Prochlorococcus marinus AS9601 Prochlorococcus marinus MIT 9515 Prochlorococcus marinus MIT 9303 Prochlorococcus marinus MIT 9215 Prochlorococcus marinus NATL1A Trichodesmium erythraeum Acaryochloris marina Bacteroides thetaiotaomicron Bacteroides fragilis YCH46 Bacteroides fragilis NCTC9343 Bacteroides vulgatus Porphyromonas gingivalis W83 Porphyromonas gingivalis ATCC 33277 Parabacteroides distasonis Salinibacter ruber Cytophaga hutchinsonii Gramella forsetii Flavobacterium johnsoniae Flavobacterium psychrophilum Candidatus Amoebophilus asiaticus Chlorobaculum tepidum Chlorobaculum parvum NCIB 8327 Chlorobium chlorochromatii Chlorobium phaeobacteroides DSM 266 Chlorobium phaeobacteroides BS1 Chlorobium limicola Prosthecochloris vibrioformis Pelodictyon luteolum Pelodictyon phaeoclathratiforme Chloroherpeton thalassium Prosthecochloris aestuarii Roseiflexus sp. RS-1 Roseiflexus castenholzii DSM13941 Chloroflexus aurantiacus Herpetosiphon aurantiacus Elusimicrobium minutum Deinococcus radiodurans Deinococcus geothermalis Hydrogenobaculum sp. Y04AAS1 Sulfurihydrogenibium sp. YO3AOP1 Thermotoga sp. RQ2 Thermosipho melanesiensis Petrotoga mobilis Dictyoglomus thermophilum Methanococcus jannaschii Methanococcus maripaludis C5 Methanococcus maripaludis C6 Methanococcus aeolicus Methanococcus vannielii Methanosarcina acetivorans Methanosarcina barkeri Methanosarcina mazei Methanococcoides burtonii Methanosaeta thermophila Methanospirillum hungatei Methanoculleus marisnigri Candidatus Methanoregula boonei Methanobacterium thermoautotrophicum Methanosphaera stadtmanae Methanobrevibacter smithii ATCC 35061 Archaeoglobus fulgidus Haloarcula marismortui Thermoplasma volcanium Picrophilus torridus Pyrococcus horikoshii Pyrococcus abyssi Pyrococcus furiosus Thermococcus onnurineus Uncultured methanogenic archaeon RC-I Aeropyrum pernix Sulfolobus solfataricus Sulfolobus tokodaii Sulfolobus acidocaldarius Metallosphaera sedula Pyrobaculum arsenaticum Caldivirga maquilingensis Thermoproteus neutrophilus Thermofilum pendens Nitrosopumilus maritimus Candidatus Korarchaeum cryptofilum     Current selection