Bile acid biosynthesis - Homo sapiens (human)

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Reference pathway Reference pathway (KO) Reference pathway (EC) Reference pathway (Reaction) -----< Sort below by alphabet >----- Homo sapiens (human) Pan troglodytes (chimpanzee) Macaca mulatta (rhesus monkey) Mus musculus (mouse) Rattus norvegicus (rat) Canis familiaris (dog) Bos taurus (cow) Sus scrofa (pig) Monodelphis domestica (opossum) Gallus gallus (chicken) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Danio rerio (zebrafish) Strongylocentrotus purpuratus (purple sea urchin) Nematostella vectensis (sea anemone) Drosophila melanogaster (fruit fly) Drosophila pseudoobscura pseudoobscura Anopheles gambiae (mosquito) Aedes aegypti (yellow fever mosquito) Caenorhabditis elegans (nematode) Trichoplax adhaerens Arabidopsis thaliana (thale cress) Oryza sativa japonica (Japanese rice) Ostreococcus lucimarinus Cyanidioschyzon merolae Saccharomyces cerevisiae Ashbya gossypii (Eremothecium gossypii) Kluyveromyces lactis Debaryomyces hansenii Pichia stipitis Vanderwaltozyma polyspora Candida albicans Candida glabrata Yarrowia lipolytica Schizosaccharomyces pombe Neurospora crassa Podospora anserina Magnaporthe grisea Fusarium graminearum Aspergillus nidulans Aspergillus fumigatus Aspergillus oryzae Aspergillus niger Neosartorya fischeri Sclerotinia sclerotiorum Cryptococcus neoformans JEC21 Cryptococcus neoformans B-3501A Laccaria bicolor Ustilago maydis Malassezia globosa Encephalitozoon cuniculi Dictyostelium discoideum Plasmodium falciparum 3D7 Tetrahymena thermophila Trypanosoma brucei Trypanosoma cruzi Leishmania major Entamoeba histolytica Trichomonas vaginalis Escherichia coli K-12 MG1655 Escherichia coli K-12 W3110 Escherichia coli O157 EDL933 (EHEC) Escherichia coli O157 Sakai (EHEC) Escherichia coli CFT073 (UPEC) Escherichia coli UTI89 (UPEC) Escherichia coli 536 (UPEC) Escherichia coli APEC O1 Escherichia coli SE11 Salmonella enterica subsp. enterica serovar Typhi CT18 Salmonella enterica subsp. enterica serovar Typhi Ty2 Salmonella enterica subsp. enterica serovar Paratyphi A Salmonella enterica subsp. enterica serovar Paratyphi B Salmonella enterica subsp. enterica serovar Choleraesuis Salmonella typhimurium LT2 Yersinia pestis CO92 Yersinia pestis KIM Yersinia pestis Mediaevails Yersinia pestis Antiqua Yersinia pestis Nepal516 Yersinia pestis Pestoides Yersinia pseudotuberculosis IP32953 Yersinia enterocolitica Shigella flexneri 301 (serotype 2a) Shigella flexneri 2457T (serotype 2a) Shigella flexneri 8401 (serotype 5b) Shigella sonnei Shigella boydii Sb227 Shigella boydii CDC 3083-94 Shigella dysenteriae Erwinia carotovora Erwinia tasmaniensis Photorhabdus luminescens Enterobacter sp. 638 Citrobacter koseri ATCC BAA-895 Serratia proteamaculans Proteus mirabilis Haemophilus influenzae Rd KW20 (serotype d) Haemophilus influenzae 86-028NP (nontypeable) Haemophilus somnus 129PT Mannheimia succiniciproducens Actinobacillus pleuropneumoniae L20 (serotype 5b) Actinobacillus succinogenes Xylella fastidiosa 9a5c Xylella fastidiosa Temecula1 Xanthomonas campestris pv. campestris ATCC 33913 Xanthomonas campestris pv. campestris 8004 Xanthomonas campestris pv. campestris B100 Xanthomonas campestris pv. vesicatoria Xanthomonas axonopodis Xanthomonas oryzae KACC10331 Xanthomonas oryzae MAFF311018 Stenotrophomonas maltophilia Stenotrophomonas maltophilia R551-3 Vibrio cholerae O1 Vibrio cholerae O395 Vibrio vulnificus CMCP6 Vibrio vulnificus YJ016 Vibrio parahaemolyticus Vibrio harveyi Vibrio fischeri Vibrio fischeri MJ11 Photobacterium profundum Pseudomonas aeruginosa PAO1 Pseudomonas aeruginosa UCBPP-PA14 Pseudomonas putida KT2440 Pseudomonas putida F1 Pseudomonas syringae pv. tomato DC3000 Pseudomonas syringae pv. syringae B728a Pseudomonas syringae pv. phaseolicola 1448A Pseudomonas fluorescens Pf-5 Pseudomonas fluorescens Pf0-1 Pseudomonas entomophila Pseudomonas mendocina Pseudomonas stutzeri Psychrobacter arcticum Psychrobacter cryohalolentis Psychrobacter sp. PRwf-1 Acinetobacter sp. ADP1 Acinetobacter baumannii ATCC 17978 Acinetobacter baumannii SDF Acinetobacter baumannii AYE Shewanella oneidensis Shewanella denitrificans Shewanella frigidimarina Shewanella amazonensis Shewanella baltica OS155 Shewanella loihica Shewanella putrefaciens Shewanella sediminis Shewanella pealeana Shewanella sp. MR-4 Shewanella sp. MR-7 Shewanella sp. ANA-3 Shewanella sp. W3-18-1 Shewanella halifaxensis Shewanella woodyi ATCC 51908 Shewanella piezotolerans WP3 Idiomarina loihiensis Colwellia psychrerythraea Pseudoalteromonas haloplanktis Pseudoalteromonas atlantica Saccharophagus degradans Marinobacter aquaeolei Psychromonas ingrahamii Coxiella burnetii RSA 493 Legionella pneumophila Philadelphia 1 Legionella pneumophila Lens Legionella pneumophila Paris Legionella pneumophila Corby Francisella tularensis subsp. tularensis SCHU S4 Francisella tularensis subsp. tularensis FSC 198 Francisella tularensis subsp. tularensis WY96-3418 Francisella tularensis subsp. holarctica LVS Francisella tularensis subsp. holarctica OSU18 Francisella tularensis subsp. holarctica FTNF002-00 Francisella tularensis subsp. novicida U112 Francisella tularensis subsp. mediasiatica FSC147 Francisella philomiragia Thiomicrospira crunogena Nitrosococcus oceani Alkalilimnicola ehrlichei Hahella chejuensis Chromohalobacter salexigens Alcanivorax borkumensis Aeromonas hydrophila Aeromonas salmonicida Acidithiobacillus ferrooxidans ATCC 53993 Neisseria meningitidis MC58 (serogroup B) Neisseria meningitidis Z2491 (serogroup A) Neisseria meningitidis FAM18 (serogroup C) Neisseria gonorrhoeae Chromobacterium violaceum Ralstonia solanacearum Ralstonia eutropha JMP134 Ralstonia eutropha H16 Ralstonia metallidurans Burkholderia mallei ATCC 23344 Burkholderia mallei SAVP1 Burkholderia mallei NCTC 10229 Burkholderia mallei NCTC 10247 Burkholderia xenovorans Burkholderia vietnamiensis Burkholderia sp. 383 Burkholderia cenocepacia AU1054 Burkholderia cenocepacia HI2424 Burkholderia cepacia Burkholderia multivorans ATCC 17616 (JGI) Burkholderia pseudomallei K96243 Burkholderia pseudomallei 1710b Burkholderia pseudomallei 1106a Burkholderia pseudomallei 668 Burkholderia thailandensis Burkholderia phytofirmans Polynucleobacter sp. QLW-P1DMWA-1 Bordetella pertussis Bordetella parapertussis Bordetella bronchiseptica Bordetella avium Rhodoferax ferrireducens Polaromonas sp. JS666 Polaromonas naphthalenivorans Acidovorax avenae Acidovorax sp. JS42 Verminephrobacter eiseniae Delftia acidovorans Methylibium petroleiphilum Herminiimonas arsenicoxydans Nitrosomonas europaea Nitrosomonas eutropha Nitrosospira multiformis Azoarcus sp. EbN1 Azoarcus sp. BH72 Dechloromonas aromatica Thiobacillus denitrificans Methylobacillus flagellatus Helicobacter pylori HPAG1 Helicobacter hepaticus Wolinella succinogenes Campylobacter fetus Sulfurovum sp. NBC37-1 Geobacter sulfurreducens Geobacter metallireducens Geobacter uraniumreducens Pelobacter carbinolicus Pelobacter propionicus Desulfovibrio vulgaris Hildenborough Desulfovibrio vulgaris DP4 Desulfovibrio desulfuricans Lawsonia intracellularis Bdellovibrio bacteriovorus Desulfotalea psychrophila Anaeromyxobacter dehalogenans Myxococcus xanthus Syntrophus aciditrophicus Syntrophobacter fumaroxidans Ehrlichia ruminantium Welgevonden (South Africa) Ehrlichia ruminantium Welgevonden (France) Candidatus Pelagibacter ubique Mesorhizobium loti Mesorhizobium sp. BNC1 Sinorhizobium meliloti Agrobacterium tumefaciens C58 (UWash/Dupont) Agrobacterium tumefaciens C58 (Cereon) Rhizobium etli CFN 42 Rhizobium leguminosarum Brucella melitensis 16M Brucella melitensis biovar Abortus Brucella abortus 9-941 Brucella abortus S19 Brucella suis 1330 Brucella suis ATCC 23445 Brucella ovis Brucella canis Ochrobactrum anthropi Bradyrhizobium japonicum Bradyrhizobium sp. ORS278 Bradyrhizobium sp. BTAi1 Rhodopseudomonas palustris CGA009 Rhodopseudomonas palustris HaA2 Rhodopseudomonas palustris BisB18 Rhodopseudomonas palustris BisB5 Rhodopseudomonas palustris BisA53 Rhodopseudomonas palustris TIE-1 Nitrobacter winogradskyi Nitrobacter hamburgensis Oligotropha carboxidovorans Bartonella henselae Bartonella quintana Bartonella bacilliformis Bartonella tribocorum Xanthobacter autotrophicus Azorhizobium caulinodans Methylobacterium extorquens Beijerinckia indica Caulobacter crescentus Silicibacter pomeroyi Silicibacter sp. TM1040 Rhodobacter sphaeroides 2.4.1 Rhodobacter sphaeroides ATCC 17029 Rhodobacter sphaeroides ATCC 17025 Jannaschia sp. CCS1 Roseobacter denitrificans Paracoccus denitrificans Dinoroseobacter shibae Maricaulis maris Hyphomonas neptunium Zymomonas mobilis Novosphingobium aromaticivorans Sphingopyxis alaskensis Erythrobacter litoralis Gluconobacter oxydans Granulobacter bethesdensis Acidiphilium cryptum JF-5 Gluconacetobacter diazotrophicus PAl 5 (Brazil) Rhodospirillum rubrum Magnetospirillum magneticum Magnetococcus sp. MC-1 Acidobacteria bacterium Solibacter usitatus Caldicellulosiruptor saccharolyticus Bacillus subtilis Bacillus halodurans Bacillus anthracis Ames Bacillus anthracis Ames 0581 Bacillus anthracis A2012 Bacillus anthracis Sterne Bacillus cereus ATCC 14579 Bacillus cereus ATCC 10987 Bacillus cereus ZK Bacillus thuringiensis 97-27 Bacillus thuringiensis Al Hakam Bacillus weihenstephanensis Bacillus licheniformis ATCC 14580 Bacillus licheniformis DSM13 Bacillus clausii Bacillus amyloliquefaciens Oceanobacillus iheyensis Geobacillus kaustophilus Geobacillus thermodenitrificans Lysinibacillus sphaericus Staphylococcus aureus N315 Staphylococcus aureus Mu50 Staphylococcus aureus MW2 Staphylococcus aureus MRSA252 Staphylococcus aureus MSSA476 Staphylococcus aureus COL Staphylococcus aureus RF122 Staphylococcus aureus USA300 Staphylococcus aureus NCTC8325 Staphylococcus aureus JH9 Staphylococcus aureus JH1 Staphylococcus aureus Newman Staphylococcus epidermidis ATCC 12228 Staphylococcus epidermidis RP62A Staphylococcus haemolyticus Staphylococcus saprophyticus Listeria monocytogenes EGD-e Listeria monocytogenes F2365 Listeria welshimeri SLCC5334 Lactococcus lactis subsp. cremoris SK11 Lactococcus lactis subsp. cremoris MG1363 Streptococcus pyogenes MGAS5005 (serotype M1) Streptococcus pyogenes MGAS10270 (serotype M3) Streptococcus pyogenes MGAS9429 (serotype M3) Streptococcus pyogenes MGAS10394 (serotype M6) Streptococcus pyogenes MGAS6180 (serotype M28) Streptococcus pneumoniae R6 Streptococcus pneumoniae D39 Streptococcus sanguinis Lactobacillus plantarum Lactobacillus johnsonii Lactobacillus acidophilus Lactobacillus sakei Lactobacillus salivarius Lactobacillus delbrueckii ATCC 11842 Lactobacillus delbrueckii ATCC BAA-365 Lactobacillus brevis Lactobacillus casei ATCC 334 Lactobacillus casei BL23 Lactobacillus gasseri Lactobacillus reuteri F275 (JGI) Lactobacillus reuteri F275 (Kitasato) Lactobacillus fermentum Enterococcus faecalis Symbiobacterium thermophilum Clostridium acetobutylicum Clostridium perfringens 13 Clostridium perfringens ATCC 13124 Clostridium perfringens SM101 Clostridium tetani E88 Clostridium novyi Clostridium thermocellum Clostridium difficile Clostridium botulinum B Eklund 17B Clostridium botulinum B1 Okra Clostridium botulinum E3 Clostridium botulinum F Langeland Clostridium beijerinckii Clostridium kluyveri Carboxydothermus hydrogenoformans Desulfitobacterium hafniense Desulfotomaculum reducens Finegoldia magna Thermoanaerobacter tengcongensis Mycoplasma penetrans Mycobacterium tuberculosis H37Rv Mycobacterium tuberculosis CDC1551 Mycobacterium tuberculosis H37Ra Mycobacterium bovis AF2122/97 Mycobacterium bovis BCG Pasteur 1173P2 Mycobacterium leprae Mycobacterium avium paratuberculosis Mycobacterium avium 104 Mycobacterium smegmatis Mycobacterium ulcerans Mycobacterium vanbaalenii Mycobacterium gilvum Mycobacterium sp. MCS Mycobacterium sp. KMS Mycobacterium sp. JLS Mycobacterium marinum M Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) Corynebacterium glutamicum ATCC 13032 (Bielefeld) Corynebacterium glutamicum R Corynebacterium efficiens Corynebacterium diphtheriae Corynebacterium jeikeium Nocardia farcinica Rhodococcus sp. RHA1 Streptomyces coelicolor Streptomyces avermitilis Tropheryma whipplei Twist Tropheryma whipplei TW08/27 Leifsonia xyli xyli CTCB07 Clavibacter michiganensis subsp. michiganensis Arthrobacter sp. FB24 Arthrobacter aurescens Kocuria rhizophila Propionibacterium acnes Nocardioides sp. JS614 Thermobifida fusca Frankia sp. CcI3 Frankia alni Acidothermus cellulolyticus Saccharopolyspora erythraea Salinispora tropica Bifidobacterium longum NCC2705 Bifidobacterium longum DJO10A Bifidobacterium longum subsp. infantis ATCC 15697 Bifidobacterium adolescentis Rubrobacter xylanophilus Fusobacterium nucleatum Rhodopirellula baltica Treponema denticola Leptospira interrogans serovar lai Leptospira interrogans serovar Copenhageni Synechocystis sp. PCC6803 Synechococcus elongatus PCC6301 Synechococcus elongatus PCC7942 Synechococcus sp. CC9605 Synechococcus sp. CC9311 Synechococcus sp. WH7803 Gloeobacter violaceus Anabaena sp. PCC7120 Anabaena variabilis Prochlorococcus marinus AS9601 Prochlorococcus marinus MIT 9301 Trichodesmium erythraeum Bacteroides thetaiotaomicron Bacteroides fragilis YCH46 Bacteroides fragilis NCTC9343 Bacteroides vulgatus Porphyromonas gingivalis W83 Parabacteroides distasonis Salinibacter ruber Cytophaga hutchinsonii Gramella forsetii Flavobacterium johnsoniae Chlorobaculum tepidum Chlorobium phaeobacteroides DSM 266 Deinococcus radiodurans Deinococcus geothermalis Thermus thermophilus HB27 Thermus thermophilus HB8 Aquifex aeolicus Thermotoga maritima Thermotoga petrophila Methanococcus jannaschii Methanococcus maripaludis S2 Methanococcus maripaludis C5 Methanosarcina acetivorans Methanosarcina barkeri Methanosarcina mazei Methanococcoides burtonii Methanospirillum hungatei Methanobacterium thermoautotrophicum Methanosphaera stadtmanae Methanobrevibacter smithii ATCC 35061 Methanopyrus kandleri Archaeoglobus fulgidus Halobacterium sp. NRC-1 Haloarcula marismortui Haloquadratum walsbyi Natronomonas pharaonis Thermoplasma acidophilum Thermoplasma volcanium Picrophilus torridus Pyrococcus horikoshii Pyrococcus abyssi Pyrococcus furiosus Thermococcus kodakaraensis Uncultured methanogenic archaeon RC-I Aeropyrum pernix Staphylothermus marinus Hyperthermus butylicus Sulfolobus solfataricus Sulfolobus tokodaii Sulfolobus acidocaldarius Metallosphaera sedula Pyrobaculum aerophilum Pyrobaculum islandicum Pyrobaculum calidifontis Pyrobaculum arsenaticum Thermofilum pendens     Current selection