KEGG Update Notes

New KEGG pathway maps

Date	Category	Pathway
2008/08/04	Human diseases	Systemic lupus erythematosus
2008/07/08	Replication and repair	Homologous recombination
2008/07/07	Human diseases	Vibrio cholerae pathogenic cycle
2008/07/07	Human diseases	Vibrio cholerae infection
2008/07/04	Xenobiotics metabolism	Drug metabolism - other enzymes
2008/07/04	Xenobiotics metabolism	Drug metabolism - cytochrome P450
2008/06/23	Human diseases	Graft-versus-host disease
2008/06/05	Replication and repair	Mismatch repair
2008/06/02	Human diseases	Allograft rejection
2008/05/28	Replication and repair	Nucleotide excision repair
2008/05/14	Replication and repair	Base excision repair
2008/04/28	Human diseases	Autoimmune thyroid disease
2008/03/08	Human diseases	Asthma
2008/03/06	Secondary metabolites	Zeatin biosynthesis
2008/02/27	Secondary metabolites	Insect hormone biosynthesis
2008/01/25	Xenobiotics metabolism	Fluorobenzoate degradation
2008/01/25	Xenobiotics metabolism	Geraniol degradation
2007/12/10	Xenobiotics metabolism	Trinitrotoluene degradation
2007/10/17	Secondary metabolites	Caffeine metabolism
2007/10/16	Secondary metabolites	Anthocyanin biosynthesis
2007/10/16	Lipid metabolism	alpha-Linolenic acid metabolism
2007/10/01	Lipid metabolism	Biosynthesis of unsaturated fatty acids
2007/08/21	Human diseases	Bladder cancer
2007/08/06	Secondary metabolites	Isoflavonoid biosynthesis
2007/07/26	Cofactor meatbolism	Lipoic acid metabolism
2007/07/24	Cell growth and death	p53 signaling pathway
2007/07/03	Human diseases	Acute myeloid leukemia
2007/05/29	Human diseases	Prostate cancer
2007/05/21	Secondary metabolites	Carotenoid biosynthesis
2007/05/02	Human diseases	Non-small cell lung cancer
2007/05/02	Human diseases	Small cell lung cancer
2007/04/09	Endocrine system	Renin-angiotensin system
2007/04/04	Signal transduction	ErbB signaling pathway
2007/04/04	Human diseases	Endometrial cancer
2007/03/15	Secondary metabolites	Brassinosteroid biosynthesis
2007/03/05	Secondary metabolites	Benzoxazinone biosynthesis
2007/02/28	Human diseases	Renal cell carcinoma
2007/02/08	Endocrine system	Melanogenesis
2007/01/22	Human diseases	Melanoma
2007/01/22	Secondary metabolites	Acridone alkaloid biosynthesis
2006/12/25	Human diseases	Basal cell carcinoma
2006/11/22	Human diseases	Thyroid cancer
2006/10/23	Human diseases	Chronic myeloid leukemia
2006/09/26	Human diseases	Glioma
2006/09/21	Energy metabolism	Photosynthesis - antenna proteins
2006/09/08	Lipid metabolism	Ether lipid metabolism
2006/09/06	Human diseases	Pancreatic cancer
2006/08/23	Endocrine system	PPAR signaling pathway
2006/08/09	Human diseases	Colorectal cancer
2006/07/05	Endocrine system	Progesterone-mediated oocyte maturation
2006/06/14	Endocrine system	GnRH signaling pathway
2006/05/30	Human diseases	Pathogenic Escherichia coli infection
2006/05/24	Sensory system	Taste transduction
2006/04/25	Sorting and degradation	Regulation of autophagy
2006/04/19	Sensory system	Olfactory transduction
2006/03/28	Signal transduction	VEGF signaling pathway
2006/03/16	Signal transduction	mTOR signaling pathway
2006/03/10	Glycan metabolism	Chondroitin sulfate biosynthesis
2006/03/10	Glycan metabolism	Heparan sulfate biosynthesis
2006/02/28	Human diseases	Epithelial cell signaling in Helicobacter pylori infection
2006/02/27	Immune system	Fc epsilon RI signaling pathway
2006/02/09	Nervous system	Long-term depression
2006/02/08	Immune system	Antigen processing and presentation
2006/02/06	Xenobiotics metabolism	Metabolism of xenobiotics by cytochrome P450
2006/02/02	Lipid metabolism	Linoleic acid metabolism
2006/02/02	Lipid metabolism	Arachidonic acid metabolism
2006/01/31	Nervous system	Long-term potentiation
2006/01/11	Human diseases	Maturity onset diabetes of the young

New KEGG drug structure maps

Date	Category	Pathway
2008/02/26	Drug development	Nicotinic cholinergic receptor antagonists
2008/02/12	Drug development	Cholinergic and anticolinergic drugs
2007/12/05	Drug development	Immunosuppressive agents
2007/11/09	Drug development	Antineoplastics - protein kinases inhibitors
2007/10/22	Drug development	Cyclooxygenase inhibitors
2007/09/14	Drug development	Antiviral
2007/08/21	Drug development	Antineoplastics - hormones
2007/08/07	Drug development	Antineoplastics - alkylating agents
2007/08/07	Drug development	Antineoplastics - antimetabolic agents
2007/08/07	Drug development	Antineoplastics - agents from natural products
2006/12/25	Drug development	Opioid analgesics
2006/11/21	Drug development	Antacids
2006/10/17	Drug development	HIV protease inhibitors
2006/09/19	Drug development	Antiarrhythmic drugs
2006/07/20	Drug development	Angiotensin antagonists
2006/06/12	Drug development	Catecholamine transferase inhibitors
2006/05/26	Drug development	alpha-Adrenergic receptor agonists/antagonists
2006/05/26	Drug development	beta-Adrenergic receptor agonists/antagonists
2006/05/09	Drug development	Calcium channel blocking agents
2006/05/09	Drug development	Anxiolytics
2006/04/11	Drug development	Eicosanoids
2006/04/11	Drug development	Prostaglandins
2006/04/10	Drug development	Butyrophenone family
2006/04/10	Drug development	Benzodiazepine family
2006/04/10	Drug development	Anticonvulsants
2006/03/15	Drug development	Hypnotics
2006/02/21	Drug development	Antipsychotics - butyrophenones
2006/02/08	Drug development	Antipsychotics
2006/02/08	Drug development	Antipsychotics - phenothiazines
2006/01/17	Drug development	Dopamine receptor antagonists/agonists
2006/01/16	Drug development	Antidepressants
2006/01/10	Drug development	Azoles

New BRITE hierarchies

Date	Category	Hierarchy
2008/07/23	Protein families	DNA repair and recombination proteins
2008/05/16	Drugs	TCM drugs in Japan
2008/03/25	Diseases	ICD-10 disease classification
2008/03/18	Protein families	DNA replication proteins
2008/01/08	Protein families	Ubiquitin system
2007/11/13	Drugs	USP drug classification
2007/10/22	Protein families	Cytoskeleton proteins
2007/09/21	Drugs	ATC classification
2007/07/23	Protein families	Glycan binding proteins
2007/06/04	Compounds	Bioactive peptides
2007/04/05	Compounds	Polyketides and nonribosomal peptides
2007/03/14	Protein families	Glycosyltransferases
2007/03/12	Protein families	Chaperones and folding catalysts
2006/12/28	Protein families	Transcription factors
2006/11/10	Compound interactions	Transporter substrates
2006/10/02	Protein families	Protein kinases
2006/10/01	Reactions	IUBMB reactions
2006/10/01	Reactions	IUBMB reaction hierarchy
2006/09/30	Reactions	Glycosyltransferase reactions
2006/09/29	Compound interactions	Nuclear receptor ligands
2006/09/29	Protein families	Peptidases
2006/09/28	Protein families	Photosynthesis proteins
2006/09/05	Compound interactions	Enzyme ligands
2006/08/21	Diseases	Human diseases
2006/07/19	Compound interactions	GPCR ligands
2006/07/11	Protein families	SNAREs
2006/05/01	Protein families	Transporters
2006/05/01	Protein families	Receptors and Channels

New KEGG organisms

Date	Category	Code	Organism
2008/08/11	Bacteria	hya	Hydrogenobaculum sp. Y04AAS1
2008/08/05	Bacteria	emi	Elusimicrobium minutum
2008/08/05	Bacteria	ypb	Yersinia pseudotuberculosis PB1/+
2008/08/05	Bacteria	sew	Salmonella enterica subsp. enterica serovar Schwarzengrund
2008/08/05	Bacteria	hps	Helicobacter pylori Shi470
2008/07/31	Bacteria	bmj	Burkholderia multivorans ATCC 17616 (Tohoku)
2008/07/29	Bacteria	btu	Borrelia turicatae
2008/07/29	Bacteria	smt	Stenotrophomonas maltophilia R551-3
2008/07/29	Bacteria	spx	Streptococcus pneumoniae G54
2008/07/29	Bacteria	lrf	Lactobacillus reuteri F275 (Kitasato)
2008/07/29	Bacteria	seh	Salmonella enterica subsp. enterica serovar Heidelber
2008/07/29	Bacteria	see	Salmonella enterica subsp. enterica serovar Newport
2008/07/29	Bacteria	amu	Akkermansia muciniphila
2008/07/24	Bacteria	paa	Prosthecochloris aestuarii
2008/07/24	Bacteria	pph	Pelodictyon phaeoclathratiforme
2008/07/18	Bacteria	pml	Candidatus Phytoplasma mali
2008/07/18	Bacteria	aas	Candidatus Amoebophilus asiaticus
2008/07/15	Bacteria	min	Methylacidiphilum infernorum
2008/07/15	Bacteria	ngk	Neisseria gonorrhoeae NCCP11945
2008/07/08	Eukaryotes	cbr	Caenorhabditis briggsae
2008/07/08	Eukaryotes	ptm	Paramecium tetraurelia
2008/07/08	Eukaryotes	aag	Aedes aegypti (yellow fever mosquito)
2008/07/03	Bacteria	cpc	Chlorobaculum parvum NCIB 8327
2008/07/03	Bacteria	cts	Chloroherpeton thalassium
2008/07/02	Bacteria	mat	Mycoplasma arthritidis
2008/06/30	Bacteria	lcb	Lactobacillus casei BL23
2008/06/26	Bacteria	rpt	Rhodopseudomonas palustris TIE-1
2008/06/26	Bacteria	cja	Cellvibrio japonicus
2008/06/26	Eukaryotes	pfh	Plasmodium falciparum HB3
2008/06/26	Eukaryotes	pfd	Plasmodium falciparum Dd2
2008/06/24	Eukaryotes	bmy	Brugia malayi (filaria)
2008/06/24	Bacteria	wpi	Wolbachia pipientis
2008/06/24	Bacteria	sml	Stenotrophomonas maltophilia
2008/06/24	Bacteria	rec	Rhizobium etli CIAT 652
2008/06/17	Bacteria	apa	Actinobacillus pleuropneumoniae AP76 (serotype 7)
2008/06/17	Bacteria	pgn	Porphyromonas gingivalis ATCC 33277
2008/06/17	Bacteria	abc	Acinetobacter baumannii ACICU
2008/06/17	Bacteria	tpp	Treponema pallidum subsp. pallidum SS14
2008/06/17	Bacteria	npu	Nostoc punctiforme
2008/06/17	Bacteria	lbf	Leptospira biflexa serovar Patoc Patoc 1 (Ames)
2008/06/17	Bacteria	sul	Sulfurihydrogenibium sp. YO3AOP1
2008/06/17	Bacteria	eta	Erwinia tasmaniensis
2008/06/12	Bacteria	cpb	Chlorobium phaeobacteroides BS1
2008/06/10	Bacteria	blj	Bifidobacterium longum DJO10A
2008/06/10	Bacteria	glo	Geobacter lovleyi
2008/06/05	Bacteria	ott	Orientia tsutsugamushi Ikeda
2008/06/05	Bacteria	bph	Burkholderia phymatum
2008/06/05	Bacteria	trq	Thermotoga sp. RQ2
2008/06/03	Eukaryotes	pan	Podospora anserina
2008/06/03	Bacteria	bmc	Brucella abortus S19
2008/06/03	Eukaryotes	vpo	Vanderwaltozyma polyspora
2008/06/03	Eukaryotes	gla	Giardia lamblia
2008/06/03	Eukaryotes	oaa	Ornithorhynchus anatinus (platypus)
2008/06/03	Eukaryotes	tca	Tribolium castaneum (red flour beetle)
2008/05/26	Bacteria	cti	Cupriavidus taiwanensis
2008/05/23	Eukaryotes	lbc	Laccaria bicolor
2008/05/15	Bacteria	krh	Kocuria rhizophila
2008/05/13	Bacteria	sbc	Shigella boydii CDC 3083-94
2008/05/13	Bacteria	ftm	Francisella tularensis subsp. mediasiatica FSC147
2008/05/13	Bacteria	bav	Bordetella avium
2008/05/13	Bacteria	cbk	Clostridium botulinum B Eklund 17B
2008/05/13	Bacteria	lfe	Lactobacillus fermentum
2008/05/13	Bacteria	ecl	Escherichia coli ATCC 8739
2008/04/24	Bacteria	mmi	Mycobacterium marinum M
2008/04/22	Bacteria	lbi	Leptospira biflexa serovar Patoc Patoc 1 (Paris)
2008/04/15	Bacteria	xfn	Xylella fastidiosa M23
2008/04/15	Bacteria	ote	Opitutus terrae
2008/04/15	Bacteria	spw	Streptococcus pneumoniae CGSP14
2008/04/15	Bacteria	sgr	Streptomyces griseus
2008/04/15	Bacteria	bid	Beijerinckia indica
2008/04/09	Bacteria	cyt	Cyanothece sp. ATCC 51142
2008/04/09	Bacteria	bac	Burkholderia ambifaria MC40-6
2008/04/09	Bacteria	esi	Exiguobacterium sibiricum
2008/04/09	Bacteria	cur	Corynebacterium urealyticum
2008/04/04	Bacteria	pne	Polynucleobacter necessarius
2008/04/02	Eukaryotes	mgl	Malassezia globosa
2008/04/02	Eukaryotes	ppp	Physcomitrella patens subsp. patens
2008/04/02	Eukaryotes	mbr	Monosiga brevicollis
2008/04/02	Bacteria	cms	Clavibacter michiganensis subsp. sepedonicus
2008/04/01	Bacteria	lch	Leptothrix cholodnii
2008/04/01	Bacteria	upa	Ureaplasma parvum
2008/04/01	Bacteria	met	Methylobacterium sp. 4-46
2008/04/01	Eukaryotes	cnb	Cryptococcus neoformans B-3501A
2008/04/01	Archaea	tne	Thermoproteus neutrophilus
2008/03/28	Bacteria	bcm	Burkholderia cenocepacia MC0-3
2008/03/28	Bacteria	ecm	Escherichia coli SECEC
2008/03/28	Bacteria	cbb	Clostridium botulinum B1 Okra
2008/03/28	Bacteria	ppw	Pseudomonas putida W619
2008/03/28	Bacteria	swd	Shewanella woodyi ATCC51908
2008/03/28	Bacteria	mrd	Methylobacterium radiotolerans
2008/03/28	Bacteria	hsm	Haemophilus somnus 2336
2008/03/28	Bacteria	xfm	Xylella fastidiosa M12
2008/03/28	Bacteria	cbl	Clostridium botulinum A3 Loch Maree
2008/03/24	Bacteria	aby	Acinetobacter baumannii AYE
2008/03/24	Archaea	kcr	Candidatus Korarchaeum cryptofilum
2008/03/21	Bacteria	lci	Leuconostoc citreum
2008/03/21	Bacteria	ecd	Escherichia coli K-12 DH10B
2008/03/21	Bacteria	syp	Synechococcus sp. PCC7002
2008/03/21	Bacteria	ypy	Yersinia pseudotuberculosis YPIII
2008/03/19	Bacteria	fma	Finegoldia magna
2008/03/19	Archaea	hsl	Halobacterium salinarum R1
2008/03/19	Bacteria	acl	Acholeplasma laidlawii
2008/03/19	Bacteria	abm	Acinetobacter baumannii SDF
2008/03/18	Bacteria	mab	Mycobacterium abscessus ATCC 19977T
2008/03/18	Bacteria	spv	Streptococcus pneumoniae Hungary19A 6
2008/03/18	Bacteria	lsp	Lysinibacillus sphaericus
2008/03/18	Bacteria	dau	Candidatus Desulforudis audaxviator
2008/03/10	Eukaryotes	ddwi	Drosophila willistoni
2008/03/10	Eukaryotes	ddsi	Drosophila simulans
2008/03/10	Eukaryotes	ddvi	Drosophila virilis
2008/03/10	Eukaryotes	ddpe	Drosophila persimilis
2008/03/10	Eukaryotes	ddmo	Drosophila mojavensis
2008/03/10	Eukaryotes	ddse	Drosophila sechellia
2008/03/10	Eukaryotes	dder	Drosophila erecta
2008/03/10	Eukaryotes	ddya	Drosophila yakuba
2008/03/10	Eukaryotes	ddgr	Drosophila grimshawi
2008/03/10	Eukaryotes	ddan	Drosophila ananassae
2008/03/05	Eukaryotes	cre	Chlamydomonas reinhardtii
2008/02/19	Bacteria	fph	Francisella philomiragia
2008/02/19	Bacteria	cak	Caulobacter sp. K31
2008/02/19	Bacteria	shl	Shewanella halifaxensis
2008/02/19	Bacteria	hmo	Heliobacterium modesticaldum
2008/02/13	Bacteria	tex	Thermoanaerobacter sp. X514
2008/02/13	Bacteria	tpd	Thermoanaerobacter pseudethanolicus
2008/02/13	Bacteria	ppg	Pseudomonas putida GB-1
2008/02/04	Bacteria	mar	Microcystis aeruginosa
2008/01/30	Bacteria	ctl	Chlamydia trachomatis L2b/UCH-1/proctitis
2008/01/30	Bacteria	ctb	Chlamydia trachomatis 434/Bu
2008/01/25	Bacteria	apj	Actinobacillus pleuropneumoniae JL03 (serotype 3)
2008/01/21	Bacteria	rrj	Rickettsia rickettsii Iowa
2008/01/04	Bacteria	bwe	Bacillus weihenstephanensis
2007/12/28	Bacteria	bpt	Bordetella petrii
2007/12/28	Bacteria	mex	Methylobacterium extorquens
2007/12/28	Bacteria	cau	Chloroflexus aurantiacus
2007/12/28	Bacteria	btr	Bartonella tribocorum
2007/12/28	Bacteria	bmt	Brucella suis ATCC 23445
2007/12/28	Bacteria	rsa	Renibacterium salmoninarum
2007/12/19	Bacteria	ypg	Yersinia pestis Angola
2007/12/19	Bacteria	nmn	Neisseria meningitidis 053442 (serogroup C)
2007/12/19	Bacteria	scl	Sorangium cellulosum
2007/12/19	Bacteria	cbs	Coxiella burnetii RSA 331
2007/12/17	Bacteria	smg	Candidatus Sulcia muelleri
2007/12/17	Bacteria	gdi	Gluconacetobacter diazotrophicus
2007/12/11	Bacteria	ses	Salmonella enterica subsp. arizonae
2007/12/11	Bacteria	sax	Staphylococcus aureus USA300 TCH1516
2007/12/11	Bacteria	spq	Salmonella enterica subsp. enterica serovar Paratyphi B
2007/12/11	Archaea	nmr	Nitrosopumilus maritimus
2007/12/07	Bacteria	lhe	Lactobacillus helveticus
2007/12/07	Bacteria	bcs	Brucella canis
2007/12/07	Bacteria	bmu	Burkholderia multivorans ATCC 17616 (JGI)
2007/11/27	Bacteria	dac	Delftia acidovorans
2007/11/27	Bacteria	cpy	Clostridium phytofermentans
2007/11/27	Bacteria	pmo	Petrotoga mobilis
2007/11/27	Bacteria	sbn	Shewanella baltica OS195
2007/11/22	Eukaryotes	fgr	Fusarium graminearum
2007/11/22	Bacteria	hau	Herpetosiphon aurantiacus
2007/11/22	Bacteria	tle	Thermotoga lettingae
2007/11/22	Archaea	mmx	Methanococcus maripaludis C6
2007/11/22	Bacteria	amr	Acaryochloris marina
2007/11/22	Bacteria	pmj	Prochlorococcus marinus MIT 9211
2007/11/14	Eukaryotes	dvvi	Vitis vinifera (wine grape)
2007/11/13	Bacteria	dsh	Dinoroseobacter shibae
2007/11/13	Bacteria	saq	Salinispora arenicola
2007/11/13	Archaea	cma	Caldivirga maquilingensis
2007/11/09	Eukaryotes	dpch	Phanerochaete chrysosporium
2007/11/09	Eukaryotes	dtps	Thalassiosira pseudonana
2007/11/08	Eukaryotes	nve	Nematostella vectensis (sea anemone)
2007/11/06	Bacteria	dol	Candidatus Desulfococcus oleovorans
2007/10/23	Bacteria	azc	Azorhizobium caulinodans
2007/10/23	Bacteria	aoe	Alkaliphilus oremlandii
2007/10/23	Bacteria	fre	Frankia sp. EAN1pec
2007/10/16	Bacteria	rms	Rickettsia massiliae
2007/10/16	Eukaryotes	dola	Oryzias latipes (Japanese medaka)
2007/10/16	Eukaryotes	decb	Equus caballus (horse)
2007/10/16	Bacteria	spl	Shewanella pealeana
2007/10/10	Bacteria	rcm	Rickettsia canadensis
2007/10/10	Bacteria	rri	Rickettsia rickettsii Sheila Smith
2007/10/10	Bacteria	rbo	Rickettsia bellii OSU 85-389
2007/10/10	Bacteria	rak	Rickettsia akari
2007/10/03	Bacteria	abu	Arcobacter butzleri
2007/10/02	Bacteria	bpu	Bacillus pumilus
2007/09/26	Bacteria	spe	Serratia proteamaculans
2007/09/26	Bacteria	sse	Shewanella sediminis
2007/09/26	Bacteria	cju	Campylobacter jejuni 81116
2007/09/26	Bacteria	pmh	Prochlorococcus marinus MIT 9215
2007/09/19	Bacteria	sgo	Streptococcus gordonii
2007/09/19	Bacteria	cko	Citrobacter koseri ATCC BAA-895
2007/09/19	Bacteria	ecx	Escherichia coli HS
2007/09/19	Bacteria	ecw	Escherichia coli E24377A
2007/09/19	Bacteria	cco	Campylobacter concisus 13826
2007/09/11	Bacteria	rca	Roseiflexus castenholzii DSM13941
2007/09/11	Bacteria	saw	Staphylococcus aureus Mu3
2007/09/11	Bacteria	vha	Vibrio harveyi
2007/09/11	Archaea	iho	Ignicoccus hospitalis
2007/09/11	Bacteria	esa	Enterobacter sakazakii
2007/09/05	Eukaryotes	aga	Anopheles gambiae (mosquito)
2007/08/30	Eukaryotes	pyo	Plasmodium yoelii
2007/08/30	Bacteria	fta	Francisella tularensis subsp. holarctica FTNF002-00
2007/08/30	Eukaryotes	yli	Yarrowia lipolytica
2007/08/30	Eukaryotes	ncr	Neurospora crassa
2007/08/14	Eukaryotes	dpo	Drosophila pseudoobscura
2007/08/09	Bacteria	bay	Bacillus amyloliquefaciens
2007/08/09	Bacteria	cbd	Coxiella burnetii Dugway 5J108-111
2007/08/06	Bacteria	xau	Xanthobacter autotrophicus
2007/08/03	Bacteria	cha	Campylobacter hominis ATCC BAA-381
2007/08/03	Bacteria	pla	Parvibaculum lavamentivorans
2007/08/03	Bacteria	fno	Fervidobacterium nodosum
2007/08/03	Bacteria	ccv	Campylobacter curvus
2007/08/03	Archaea	mbn	Candidatus Methanoregula boonei
2007/08/01	Bacteria	ypi	Yersinia pseudotuberculosis IP31758
2007/08/01	Bacteria	cbh	Clostridium botulinum A Hall
2007/08/01	Bacteria	cjd	Campylobacter jejuni subsp. doylei 269.97
2007/08/01	Bacteria	kpn	Klebsiella pneumoniae
2007/08/01	Bacteria	nis	Nitratiruptor sp. SB155-2
2007/08/01	Bacteria	cba	Clostridium botulinum A ATCC 19397
2007/08/01	Bacteria	bcy	Bacillus cereus subsp. cytotoxis NVH 391-98
2007/08/01	Bacteria	ckl	Clostridium kluyveri
2007/08/01	Bacteria	sun	Sulfurovum sp. NBC37-1
2007/08/01	Bacteria	sbm	Shewanella baltica OS185
2007/08/01	Bacteria	mmw	Marinomonas sp. MWYL1
2007/08/01	Bacteria	pap	Pseudomonas aeruginosa PA7
2007/07/31	Bacteria	oan	Ochrobactrum anthropi
2007/07/31	Bacteria	cbf	Clostridium botulinum F Langeland
2007/07/31	Bacteria	asu	Actinobacillus succinogenes
2007/07/31	Bacteria	mms	Minibacterium massiliensis
2007/07/31	Bacteria	afw	Anaeromyxobacter sp. Fw109-5
2007/07/31	Bacteria	kra	Kineococcus radiotolerans
2007/07/10	Eukaryotes	aag	Aedes aegypti (yellow fever mosquito)
2007/07/10	Eukaryotes	dpop	Populus trichocarpa (black cottonwood)
2007/07/10	Bacteria	sae	Staphylococcus aureus Newman
2007/07/09	Archaea	mvn	Methanococcus vannielii
2007/07/09	Bacteria	amt	Alkaliphilus metalliredigens
2007/07/09	Bacteria	smd	Sinorhizobium medicae
2007/07/09	Bacteria	sah	Staphylococcus aureus JH1
2007/07/09	Archaea	mae	Methanococcus aeolicus
2007/07/09	Archaea	mmz	Methanococcus maripaludis C7
2007/07/04	Eukaryotes	mdo	Monodelphis domestica (opossum)
2007/07/04	Eukaryotes	ang	Aspergillus niger
2007/07/03	Bacteria	bvu	Bacteroides vulgatus
2007/07/03	Bacteria	cbe	Clostridium beijerinckii
2007/07/03	Bacteria	pdi	Parabacteroides distasonis
2007/07/03	Bacteria	tme	Thermosipho melanesiensis
2007/07/03	Bacteria	fps	Flavobacterium psychrophilum
2007/06/20	Bacteria	cbo	Clostridium botulinum A ATCC 3502
2007/06/20	Bacteria	mtf	Mycobacterium tuberculosis F11
2007/06/20	Bacteria	hiq	Haemophilus influenzae PittGG
2007/06/20	Bacteria	hip	Haemophilus influenzae PittEE
2007/06/12	Bacteria	ppf	Pseudomonas putida F1
2007/06/12	Bacteria	lre	Lactobacillus reuteri F275 (JGI)
2007/06/12	Bacteria	swi	Sphingomonas wittichii
2007/06/12	Bacteria	mra	Mycobacterium tuberculosis H37Ra
2007/06/12	Bacteria	maa	Mycoplasma agalactiae
2007/06/12	Archaea	msi	Methanobrevibacter smithii ATCC 35061
2007/06/12	Bacteria	rrs	Roseiflexus sp. RS-1
2007/06/12	Bacteria	pcr	Psychrobacter cryohalolentis
2007/06/11	Bacteria	bov	Brucella ovis
2007/06/07	Eukaryotes	mcc	Macaca mulatta (rhesus monkey)
2007/06/07	Eukaryotes	mgr	Magnaporthe grisea
2007/06/07	Eukaryotes	kla	Kluyveromyces lactis
2007/06/07	Eukaryotes	olu	Ostreococcus lucimarinus
2007/06/07	Eukaryotes	cgr	Candida glabrata
2007/06/07	Eukaryotes	dha	Debaryomyces hansenii
2007/05/31	Bacteria	lpc	Legionella pneumophila Corby
2007/05/29	Bacteria	saj	Staphylococcus aureus JH9
2007/05/29	Bacteria	cmi	Clavibacter michiganensis subsp. michiganensis
2007/05/29	Bacteria	vok	Candidatus Vesicomyosocius okutanii
2007/05/29	Bacteria	gur	Geobacter uraniumreducens
2007/05/29	Archaea	rci	Uncultured methanogenic archaeon RC-I
2007/05/29	Bacteria	acr	Acidiphilium cryptum JF-5
2007/05/29	Bacteria	syx	Synechococcus sp. WH7803
2007/05/29	Bacteria	ots	Orientia tsutsugamushi Boryong
2007/05/29	Bacteria	syr	Synechococcus sp. RCC307
2007/05/29	Bacteria	bbt	Bradyrhizobium sp. BTAi1
2007/05/29	Bacteria	tpt	Thermotoga petrophila
2007/05/23	Bacteria	vco	Vibrio cholerae O395
2007/05/22	Bacteria	pth	Pelotomaculum thermopropionicum
2007/05/22	Bacteria	deb	Dehalococcoides sp. BAV1
2007/05/15	Bacteria	psa	Pseudomonas stutzeri
2007/05/15	Bacteria	spc	Shewanella putrefaciens
2007/05/15	Bacteria	dno	Dichelobacter nodosus
2007/05/15	Bacteria	csc	Caldicellulosiruptor saccharolyticus
2007/05/15	Bacteria	ssu	Streptococcus suis 05ZYH33
2007/05/15	Bacteria	pmy	Pseudomonas mendocina
2007/05/15	Bacteria	rsq	Rhodobacter sphaeroides ATCC 17025
2007/05/15	Bacteria	ent	Enterobacter sp. 638
2007/05/15	Archaea	mse	Metallosphaera sedula
2007/05/15	Bacteria	bra	Bradyrhizobium sp. ORS278
2007/05/15	Bacteria	ssv	Streptococcus suis 98HAH33
2007/05/15	Bacteria	fjo	Flavobacterium johnsoniae
2007/05/02	Archaea	pas	Pyrobaculum arsenaticum
2007/05/02	Bacteria	pnu	Polynucleobacter sp. QLW-P1DMWA-1
2007/05/02	Eukaryotes	tva	Trichomonas vaginalis
2007/05/02	Bacteria	stp	Salinispora tropica
2007/05/02	Bacteria	ypp	Yersinia pestis Pestoides
2007/05/02	Eukaryotes	pic	Pichia stipitis
2007/04/23	Bacteria	cgt	Corynebacterium glutamicum R
2007/04/23	Bacteria	asa	Aeromonas salmonicida
2007/04/20	Bacteria	pvi	Prosthecochloris vibrioformis
2007/04/20	Bacteria	mgi	Mycobacterium gilvum
2007/04/17	Eukaryotes	ptm	Paramecium tetraurelia
2007/04/12	Bacteria	ftw	Francisella tularensis subsp. tularensis WY96-3418
2007/04/12	Bacteria	bvi	Burkholderia vietnamiensis
2007/04/12	Bacteria	drm	Desulfotomaculum reducens
2007/04/09	Bacteria	gtn	Geobacillus thermodenitrificans
2007/04/09	Bacteria	spf	Streptococcus pyogenes Manfredo (serotype M5)
2007/04/05	Eukaryotes	dota	Ostreococcus tauri
2007/04/03	Eukaryotes	tet	Tetrahymena thermophila
2007/04/03	Eukaryotes	uma	Ustilago maydis
2007/03/30	Bacteria	sen	Saccharopolyspora erythraea
2007/03/30	Archaea	mmq	Methanococcus maripaludis C5
2007/03/30	Bacteria	har	Herminiimonas arsenicoxydans
2007/03/29	Bacteria	cdf	Clostridium difficile
2007/03/13	Bacteria	pmg	Prochlorococcus marinus MIT 9301
2007/03/13	Bacteria	slo	Shewanella loihica
2007/03/13	Bacteria	acb	Acinetobacter baumannii ATCC 17978
2007/03/07	Archaea	smr	Staphylothermus marinus
2007/03/07	Bacteria	bmn	Burkholderia mallei NCTC 10247
2007/03/07	Bacteria	mjl	Mycobacterium sp. JLS
2007/03/07	Archaea	pcl	Pyrobaculum calidifontis
2007/03/07	Bacteria	rsh	Rhodobacter sphaeroides ATCC 17029
2007/03/07	Bacteria	bpl	Burkholderia pseudomallei 1106a
2007/03/07	Bacteria	bpd	Burkholderia pseudomallei 668
2007/03/05	Bacteria	apl	Actinobacillus pleuropneumoniae L20 (serotype 5b)
2007/03/05	Bacteria	sbl	Shewanella baltica OS155
2007/03/05	Archaea	mem	Methanoculleus marisnigri
2007/02/21	Bacteria	llm	Lactococcus lactis subsp. cremoris MG1363
2007/02/20	Bacteria	cth	Clostridium thermocellum
2007/02/20	Bacteria	ssa	Streptococcus sanguinis
2007/02/13	Archaea	mla	Methanocorpusculum labreanum
2007/02/07	Bacteria	bml	Burkholderia mallei NCTC 10229
2007/02/06	Bacteria	mpt	Methylibium petroleiphilum
2007/01/30	Bacteria	yen	Yersinia enterocolitica
2007/01/30	Bacteria	pmf	Prochlorococcus marinus MIT 9303
2007/01/30	Archaea	hbu	Hyperthermus butylicus
2007/01/29	Bacteria	pme	Prochlorococcus marinus NATL1A
2007/01/25	Bacteria	pmb	Prochlorococcus marinus AS9601
2007/01/25	Bacteria	pmc	Prochlorococcus marinus MIT 9515
2007/01/18	Bacteria	cjj	Campylobacter jejuni 81-176
2007/01/18	Bacteria	nmc	Neisseria meningitidis FAM18 (serogroup C)
2007/01/18	Bacteria	mbb	Mycobacterium bovis BCG Pasteur 1173P2
2007/01/18	Bacteria	bmv	Burkholderia mallei SAVP1
2007/01/18	Bacteria	vei	Verminephrobacter eiseniae
2007/01/17	Bacteria	maq	Marinobacter aquaeolei
2007/01/17	Bacteria	hha	Halorhodospira halophila
2007/01/17	Bacteria	pna	Polaromonas naphthalenivorans
2007/01/17	Bacteria	bbk	Bartonella bacilliformis
2007/01/17	Bacteria	ajs	Acidovorax sp. JS42
2007/01/10	Bacteria	dvl	Desulfovibrio vulgaris DP4
2007/01/10	Bacteria	shw	Shewanella sp. W3-18-1
2007/01/10	Bacteria	aav	Acidovorax avenae
2007/01/04	Bacteria	gfo	Gramella forsetii
2007/01/04	Bacteria	mva	Mycobacterium vanbaalenii
2007/01/04	Bacteria	aau	Arthrobacter aurescens
2007/01/04	Bacteria	pin	Psychromonas ingrahamii
2006/12/28	Bacteria	azo	Azoarcus sp. BH72
2006/12/28	Archaea	tpe	Thermofilum pendens
2006/12/28	Bacteria	nca	Nocardioides sp. JS614
2006/12/28	Bacteria	saz	Shewanella amazonensis
2006/12/26	Bacteria	mkm	Mycobacterium sp. KMS
2006/12/26	Archaea	pis	Pyrobaculum islandicum
2006/12/19	Bacteria	pde	Paracoccus denitrificans
2006/12/15	Bacteria	cph	Chlorobium phaeobacteroides DSM 266
2006/12/13	Bacteria	ppd	Pelobacter propionicus
2006/12/13	Eukaryotes	spu	Strongylocentrotus purpuratus (purple sea urchin)
2006/12/12	Bacteria	bad	Bifidobacterium adolescentis
2006/12/12	Bacteria	mul	Mycobacterium ulcerans
2006/12/12	Bacteria	rma	Candidatus Ruthia magnifica
2006/12/07	Bacteria	shn	Shewanella sp. ANA-3
2006/12/06	Bacteria	cff	Campylobacter fetus
2006/12/06	Bacteria	btl	Bacillus thuringiensis Al Hakam
2006/12/05	Bacteria	mav	Mycobacterium avium 104
2006/12/05	Bacteria	cno	Clostridium novyi
2006/12/05	Bacteria	msm	Mycobacterium smegmatis
2006/12/05	Bacteria	ftn	Francisella tularensis subsp. novicida U112
2006/11/17	Bacteria	ace	Acidothermus cellulolyticus
2006/11/17	Bacteria	rle	Rhizobium leguminosarum
2006/11/16	Bacteria	mgm	Magnetococcus sp. MC-1
2006/11/13	Bacteria	ecv	Escherichia coli APEC O1
2006/11/13	Bacteria	aha	Aeromonas hydrophila
2006/11/07	Bacteria	lwe	Listeria welshimeri SLCC5334
2006/11/07	Bacteria	bcc	Buchnera aphidicola Cc
2006/11/07	Bacteria	art	Arthrobacter sp. FB24
2006/11/01	Bacteria	llc	Lactococcus lactis subsp. cremoris SK11
2006/11/01	Bacteria	lbu	Lactobacillus delbrueckii ATCC BAA-365
2006/10/31	Archaea	mtp	Methanosaeta thermophila
2006/10/31	Bacteria	sfu	Syntrophobacter fumaroxidans
2006/10/31	Bacteria	reh	Ralstonia eutropha H16
2006/10/31	Bacteria	bch	Burkholderia cenocepacia HI2424
2006/10/27	Bacteria	spd	Streptococcus pneumoniae D39
2006/10/27	Bacteria	lga	Lactobacillus gasseri
2006/10/27	Bacteria	lme	Leuconostoc mesenteroides
2006/10/27	Bacteria	ste	Streptococcus thermophilus LMD-9
2006/10/27	Bacteria	sus	Solibacter usitatus
2006/10/26	Bacteria	ppe	Pediococcus pentosaceus
2006/10/26	Bacteria	lbr	Lactobacillus brevis
2006/10/26	Bacteria	lca	Lactobacillus casei ATCC 334
2006/10/26	Bacteria	ooe	Oenococcus oeni
2006/10/24	Bacteria	lbj	Leptospira borgpetersenii JB197
2006/10/24	Bacteria	lbl	Leptospira borgpetersenii L550
2006/10/24	Bacteria	crp	Candidatus Carsonella ruddii
2006/10/18	Bacteria	pau	Pseudomonas aeruginosa UCBPP-PA14
2006/10/17	Bacteria	rpe	Rhodopseudomonas palustris BisA53
2006/10/03	Bacteria	fth	Francisella tularensis subsp. holarctica OSU18
2006/10/03	Bacteria	bam	Burkholderia cepacia
2006/09/22	Bacteria	hne	Hyphomonas neptunium
2006/09/20	Bacteria	swo	Syntrophomonas wolfei
2006/09/20	Bacteria	sfr	Shewanella frigidimarina
2006/09/20	Bacteria	mmr	Maricaulis maris
2006/09/20	Bacteria	gbe	Granulobacter bethesdensis
2006/09/20	Bacteria	net	Nitrosomonas eutropha
2006/09/20	Bacteria	aeh	Alkalilimnicola ehrlichei
2006/09/11	Bacteria	she	Shewanella sp. MR-4
2006/09/11	Bacteria	syg	Synechococcus sp. CC9311
2006/09/11	Bacteria	shm	Shewanella sp. MR-7
2006/09/05	Bacteria	ter	Trichodesmium erythraeum
2006/09/01	Bacteria	hso	Haemophilus somnus 129PT
2006/09/01	Bacteria	chu	Cytophaga hutchinsonii
2006/08/11	Bacteria	fal	Frankia alni
2006/08/05	Bacteria	baf	Borrelia afzelii
2006/08/04	Bacteria	abo	Alcanivorax borkumensis
2006/08/04	Bacteria	rha	Rhodococcus sp. RHA1
2006/08/04	Bacteria	ftf	Francisella tularensis subsp. tularensis FSC 198
2006/08/02	Bacteria	cpf	Clostridium perfringens ATCC 13124
2006/08/02	Bacteria	cpr	Clostridium perfringens SM101
2006/08/01	Bacteria	sfv	Shigella flexneri 8401 (serotype 5b)
2006/07/28	Bacteria	rde	Roseobacter denitrificans
2006/07/28	Archaea	hwa	Haloquadratum walsbyi
2006/07/27	Bacteria	ecp	Escherichia coli 536 (UPEC)
2006/07/27	Bacteria	mes	Mesorhizobium sp. BNC1
2006/07/05	Bacteria	pat	Pseudoalteromonas atlantica
2006/07/05	Bacteria	hac	Helicobacter acinonychis
2006/06/15	Bacteria	ypn	Yersinia pestis Nepal516
2006/06/15	Bacteria	ypa	Yersinia pestis Antiqua
2006/06/14	Bacteria	rxy	Rubrobacter xylanophilus
2006/06/14	Bacteria	mmc	Mycobacterium sp. MCS
2006/06/13	Bacteria	mxa	Myxococcus xanthus
2006/06/12	Bacteria	hpa	Helicobacter pylori HPAG1
2006/06/09	Bacteria	ldb	Lactobacillus delbrueckii ATCC 11842
2006/06/07	Bacteria	bcn	Burkholderia cenocepacia AU1054
2006/06/06	Bacteria	pen	Pseudomonas entomophila
2006/06/05	Bacteria	sal	Sphingopyxis alaskensis
2006/05/26	Bacteria	sit	Silicibacter sp. TM1040
2006/05/26	Bacteria	xom	Xanthomonas oryzae MAFF311018
2006/05/12	Bacteria	aba	Acidobacteria bacterium
2006/05/12	Bacteria	dge	Deinococcus geothermalis
2006/05/12	Bacteria	lip	Lawsonia intracellularis
2006/05/11	Bacteria	spj	Streptococcus pyogenes MGAS2096 (serotype M3)
2006/05/11	Bacteria	spk	Streptococcus pyogenes MGAS9429 (serotype M3)
2006/05/11	Bacteria	spi	Streptococcus pyogenes MGAS10750 (serotype M3)
2006/05/11	Bacteria	sph	Streptococcus pyogenes MGAS10270 (serotype M3)
2006/05/10	Bacteria	bci	Baumannia cicadellinicola
2006/05/10	Bacteria	rme	Ralstonia metallidurans
2006/05/10	Bacteria	pcr	Psychrobacter cryohalolentis
2006/05/10	Eukaryotes	dpkn	Plasmodium knowlesi
2006/04/21	Bacteria	csa	Chromohalobacter salexigens
2006/04/21	Bacteria	sat	Syntrophus aciditrophicus
2006/04/21	Bacteria	nha	Nitrobacter hamburgensis
2006/04/17	Bacteria	mfa	Methylobacillus flagellatus
2006/04/17	Bacteria	rpd	Rhodopseudomonas palustris BisB5
2006/04/17	Bacteria	sdn	Shewanella denitrificans
2006/04/14	Bacteria	bxe	Burkholderia xenovorans
2006/04/14	Archaea	mbu	Methanococcoides burtonii
2006/04/14	Bacteria	pol	Polaromonas sp. JS666
2006/04/11	Bacteria	rbe	Rickettsia bellii RML369-C
2006/04/11	Bacteria	eci	Escherichia coli UTI89 (UPEC)
2006/04/04	Bacteria	lsl	Lactobacillus salivarius
2006/03/31	Bacteria	rpc	Rhodopseudomonas palustris BisB18
2006/03/23	Bacteria	rfr	Rhodoferax ferrireducens
2006/03/23	Eukaryotes	afm	Aspergillus fumigatus
2006/03/23	Bacteria	dsy	Desulfitobacterium hafniense
2006/03/23	Bacteria	sde	Saccharophagus degradans
2006/03/23	Bacteria	cfe	Chlamydophila felis
2006/03/23	Eukaryotes	ani	Aspergillus nidulans
2006/03/23	Eukaryotes	aor	Aspergillus oryzae
2006/03/22	Bacteria	ftl	Francisella tularensis subsp. holarctica LVS
2006/03/06	Bacteria	jan	Jannaschia sp. CCS1
2006/02/27	Bacteria	nse	Neorickettsia sennetsu
2006/02/27	Bacteria	ech	Ehrlichia chaffeensis
2006/02/27	Bacteria	ade	Anaeromyxobacter dehalogenans
2006/02/27	Bacteria	aph	Anaplasma phagocytophilum
2006/02/23	Bacteria	sao	Staphylococcus aureus NCTC8325
2006/02/23	Archaea	mhu	Methanospirillum hungatei
2006/02/16	Bacteria	saa	Staphylococcus aureus USA300
2006/02/16	Bacteria	nar	Novosphingobium aromaticivorans
2006/02/14	Bacteria	rpb	Rhodopseudomonas palustris HaA2
2006/02/14	Bacteria	fra	Frankia sp. CcI3
2006/02/14	Bacteria	cya	Cyanobacteria Yellowstone A-Prime
2006/02/14	Bacteria	cyb	Cyanobacteria Yellowstone B-Prime
2006/02/06	Bacteria	ret	Rhizobium etli CFN 42
2006/01/25	Bacteria	eli	Erythrobacter litoralis
2006/01/25	Bacteria	sgl	Sodalis glossinidius
2006/01/25	Bacteria	ayw	Phytoplasma AYWB
2006/01/13	Archaea	mst	Methanosphaera stadtmanae