KEGG icon

KEGG Organisms: Complete Genomes

Eukaryotes: 133 + 16(draft)    Bacteria: 1077    Archaea: 87
[ Genomes | ESTs | Meta | Pan ]

Eukaryotes

Category Species Source
Animals Vertebrates Mammals hsa Homo sapiens (human) RefSeq
ptr Pan troglodytes (chimpanzee) RefSeq
mcc Macaca mulatta (rhesus monkey) RefSeq
mmu Mus musculus (mouse) RefSeq
rno Rattus norvegicus (rat) RefSeq
cfa Canis familiaris (dog) RefSeq
bta Bos taurus (cow) RefSeq
ssc Sus scrofa (pig) RefSeq
ecb Equus caballus (horse) RefSeq
mdo Monodelphis domestica (opossum) RefSeq
oaa Ornithorhynchus anatinus (platypus) RefSeq
Birds gga Gallus gallus (chicken) RefSeq
tgu Taeniopygia guttata (zebra finch) RefSeq
Amphibians xla Xenopus laevis (African clawed frog) RefSeq
xtr Xenopus tropicalis (western clawed frog) RefSeq
Fishes dre Danio rerio (zebrafish) RefSeq
dfru Fugu rubripes (Japanese puffer fish) Ensembl
dtni Tetraodon nigroviridis (green spotted puffer) GenBank
dola Oryzias latipes (Japanese medaka) Ensembl
Lancelets bfo Branchiostoma floridae (Florida lancelet) RefSeq
Ascidians cin Ciona intestinalis (sea squirt) RefSeq
Echinoderms spu Strongylocentrotus purpuratus (purple sea urchin) RefSeq
Arthropods Insects dme Drosophila melanogaster (fruit fly) RefSeq
dpo Drosophila pseudoobscura pseudoobscura RefSeq
dan Drosophila ananassae RefSeq
der Drosophila erecta RefSeq
dpe Drosophila persimilis RefSeq
dse Drosophila sechellia RefSeq
dsi Drosophila simulans RefSeq
dwi Drosophila willistoni RefSeq
dya Drosophila yakuba RefSeq
dgr Drosophila grimshawi RefSeq
dmo Drosophila mojavensis RefSeq
dvi Drosophila virilis RefSeq
aga Anopheles gambiae (mosquito) RefSeq
aag Aedes aegypti (yellow fever mosquito) RefSeq
cqu Culex quinquefasciatus (southern house mosquito) RefSeq
ame Apis mellifera (honey bee) RefSeq
nvi Nasonia vitripennis (jewel wasp) RefSeq
dbmo Bombyx mori (silkmoth) Beijing
tca Tribolium castaneum (red flour beetle) RefSeq
api Acyrthosiphon pisum (pea aphid) RefSeq
dapi Acyrthosiphon pisum (pea aphid) (AphidBase) AphidBase
phu Pediculus humanus corporis (human body louse) RefSeq
dphu Pediculus humanus (human body louse) (VectorBase) VectorBase
Crustaceans ddpu Daphnia pulex (water flea) JGI
Mites and ticks isc Ixodes scapularis (black-legged tick) RefSeq
Nematodes cel Caenorhabditis elegans (nematode) RefSeq
cbr Caenorhabditis briggsae RefSeq
bmy Brugia malayi (filaria) RefSeq
Flatworms smm Schistosoma mansoni RefSeq
Cnidarians nve Nematostella vectensis (sea anemone) RefSeq
hmg Hydra magnipapillata RefSeq
Placozoans tad Trichoplax adhaerens RefSeq
Plants Eudicots Mustard family ath Arabidopsis thaliana (thale cress) RefSeq
Pea family dlja Lotus japonicus (lotus) Kazusa
Willow family pop Populus trichocarpa (black cottonwood) RefSeq
Spurge family rcu Ricinus communis (castor bean) RefSeq
Grape family vvi Vitis vinifera (wine grape) RefSeq
Monocots Grass family osa Oryza sativa japonica (Japanese rice) RefSeq
dosa Oryza sativa japonica (Japanese rice) (RAPDB) RAP-DB
sbi Sorghum bicolor (sorghum) RefSeq
zma Zea mays (maize) RefSeq
Mosses ppp Physcomitrella patens subsp. patens RefSeq
Green algae cre Chlamydomonas reinhardtii RefSeq
olu Ostreococcus lucimarinus RefSeq
dota Ostreococcus tauri Ghent
Red algae cme Cyanidioschyzon merolae U Tokyo
Fungi Ascomycetes Saccharomycetes sce Saccharomyces cerevisiae (budding yeast) RefSeq
dsrd Saccharomyces paradoxus SGD
dsmi Saccharomyces mikatae SGD
dsba Saccharomyces bayanus SGD
ago Ashbya gossypii (Eremothecium gossypii) RefSeq
kla Kluyveromyces lactis RefSeq
lth Lachancea thermotolerans RefSeq
dkwa Kluyveromyces waltii Nature
ppa Pichia pastoris RefSeq
vpo Vanderwaltozyma polyspora RefSeq
zro Zygosaccharomyces rouxii RefSeq
cgr Candida glabrata RefSeq
dha Debaryomyces hansenii RefSeq
pic Scheffersomyces stipitis RefSeq
pgu Meyerozyma guilliermondii RefSeq
lel Lodderomyces elongisporus RefSeq
cal Candida albicans RefSeq
ctp Candida tropicalis RefSeq
cdu Candida dubliniensis RefSeq
yli Yarrowia lipolytica RefSeq
clu Clavispora lusitaniae RefSeq
Sordariomycetes ncr Neurospora crassa RefSeq
pan Podospora anserina RefSeq
mgr Magnaporthe oryzae RefSeq
fgr Fusarium graminearum RefSeq
Leotiomycetes ssl Sclerotinia sclerotiorum RefSeq
bfu Botryotinia fuckeliana RefSeq
Eurotiomycetes ani Aspergillus nidulans RefSeq
dani Aspergillus nidulans (BROAD) BROAD
afm Aspergillus fumigatus RefSeq
nfi Neosartorya fischeri RefSeq
aor Aspergillus oryzae RefSeq
ang Aspergillus niger RefSeq
afv Aspergillus flavus RefSeq
act Aspergillus clavatus RefSeq
pcs Penicillium chrysogenum RefSeq
cim Coccidioides immitis RefSeq
ure Uncinocarpus reesii RefSeq
Dothideomycetes pno Phaeosphaeria nodorum RefSeq
Pezizomycetes tml Tuber melanosporum RefSeq
Schizosaccharomycetes spo Schizosaccharomyces pombe (fission yeast) RefSeq
Basidiomycetes cne Cryptococcus neoformans JEC21 RefSeq
cnb Cryptococcus neoformans B-3501A RefSeq
ppl Postia placenta RefSeq
dpch Phanerochaete chrysosporium JGI
lbc Laccaria bicolor RefSeq
mpr Moniliophthora perniciosa RefSeq
cci Coprinopsis cinerea RefSeq
uma Ustilago maydis RefSeq
mgl Malassezia globosa RefSeq
Microsporidians ecu Encephalitozoon cuniculi RefSeq
Protists Choanoflagellates mbr Monosiga brevicollis RefSeq
Amoeboflagellate ngr Naegleria gruberi RefSeq
Amoebozoa Dictyostelium ddi Dictyostelium discoideum (cellular slime mold) RefSeq
Entamoeba ehi Entamoeba histolytica RefSeq
edi Entamoeba dispar RefSeq
Alveolates Apicomplexans pfa Plasmodium falciparum 3D7 RefSeq
pfd Plasmodium falciparum Dd2 Broad
pfh Plasmodium falciparum HB3 Broad
pyo Plasmodium yoelii RefSeq
pcb Plasmodium chabaudi RefSeq
pbe Plasmodium berghei RefSeq
pkn Plasmodium knowlesi RefSeq
pvx Plasmodium vivax RefSeq
tan Theileria annulata RefSeq
tpv Theileria parva RefSeq
bbo Babesia bovis RefSeq
cpv Cryptosporidium parvum RefSeq
cho Cryptosporidium hominis RefSeq
tgo Toxoplasma gondii RefSeq
Ciliates tet Tetrahymena thermophila RefSeq
ptm Paramecium tetraurelia RefSeq
Euglenozoa Kinetoplasts tbr Trypanosoma brucei RefSeq
tcr Trypanosoma cruzi RefSeq
lma Leishmania major RefSeq
lif Leishmania infantum RefSeq
lbz Leishmania braziliensis RefSeq
Diplomonads gla Giardia lamblia RefSeq
Parabasalids tva Trichomonas vaginalis RefSeq
Diatoms pti Phaeodactylum tricornutum RefSeq
tps Thalassiosira pseudonana RefSeq

Prokaryotes

Category Species Year Source
Bacteria Gammaproteobacteria Escherichia eco Escherichia coli K-12 MG1655 1997 RefSeq
ecj Escherichia coli K-12 W3110 2001 RefSeq
ecd Escherichia coli K-12 DH10B 2008 RefSeq
ebw Escherichia coli K-12 MC4100(MuLac) BW2952 2009 RefSeq
ece Escherichia coli O157:H7 EDL933 (EHEC) 2001 RefSeq
ecs Escherichia coli O157:H7 Sakai (EHEC) 2001 RefSeq
ecf Escherichia coli O157:H7 EC4115 (EHEC) 2008 RefSeq
etw Escherichia coli O157:H7 TW14359 (EHEC) 2009 RefSeq
eoj Escherichia coli O26:H11 11368 (EHEC) 2009 RefSeq
eoi Escherichia coli O111:H- 11128 (EHEC) 2009 RefSeq
eoh Escherichia coli O103:H2 12009 (EHEC) 2009 RefSeq
ecg Escherichia coli O127:H6 E2348/69 (EPEC) 2008 RefSeq
eok Escherichia coli O55:H7 CB9615 (EPEC) 2010 RefSeq
ecc Escherichia coli O6:K2:H1 CFT073 (UPEC) 2002 RefSeq
ecp Escherichia coli O6:K15:H31 536 (UPEC) 2006 RefSeq
eci Escherichia coli O18:K1:H7 UTI89 (UPEC) 2006 RefSeq
ecv Escherichia coli O1:K1:H7 (APEC) 2006 RefSeq
ecx Escherichia coli O9 HS (commensal) 2007 RefSeq
ecw Escherichia coli O139:H28 E24377A (ETEC) 2007 RefSeq
ecm Escherichia coli SMS-3-5 (environmental) 2008 RefSeq
ecy Escherichia coli O152:H28 SE11 (commensal) 2008 RefSeq
ecr Escherichia coli O8 IAI1 (commensal) 2009 RefSeq
ecq Escherichia coli O81 ED1a (commensal) 2009 RefSeq
eck Escherichia coli 55989 (EAEC) 2009 RefSeq
ect Escherichia coli O7:K1 IAI39 (ExPEC) 2009 RefSeq
eum Escherichia coli O17:K52:H18 UMN026 (ExPEC) 2009 RefSeq
ecz Escherichia coli O45:K1:H7 S88 (ExPEC) 2009 RefSeq
ecl Escherichia coli C ATCC 8739 2008 RefSeq
ebr Escherichia coli B REL606 2009 RefSeq
ebd Escherichia coli BL21-Gold(DE3)pLysS AG 2009 RefSeq
efe Escherichia fergusonii 2008 RefSeq
Salmonella sty Salmonella enterica subsp. enterica serovar Typhi CT18 2001 RefSeq
stt Salmonella enterica subsp. enterica serovar Typhi Ty2 2003 RefSeq
stm Salmonella enterica subsp. enterica serovar Typhimurium LT2 2001 RefSeq
spt Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150 2004 RefSeq
sek Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601 2008 RefSeq
spq Salmonella enterica subsp. enterica serovar Paratyphi B 2007 RefSeq
sei Salmonella enterica subsp. enterica serovar Paratyphi C 2009 RefSeq
sec Salmonella enterica subsp. enterica serovar Choleraesuis 2005 RefSeq
seh Salmonella enterica subsp. enterica serovar Heidelberg 2008 RefSeq
see Salmonella enterica subsp. enterica serovar Newport 2008 RefSeq
sew Salmonella enterica subsp. enterica serovar Schwarzengrund 2008 RefSeq
sea Salmonella enterica subsp. enterica serovar Agona 2008 RefSeq
sed Salmonella enterica subsp. enterica serovar Dublin 2008 RefSeq
seg Salmonella enterica subsp. enterica serovar Gallinarum 2008 RefSeq
set Salmonella enterica subsp. enterica serovar Enteritidis 2008 RefSeq
ses Salmonella enterica subsp. arizonae 2007 RefSeq
Yersinia ype Yersinia pestis CO92 (biovar Orientalis) 2001 RefSeq
ypk Yersinia pestis KIM 10 (biovar Mediaevalis) 2002 RefSeq
ypa Yersinia pestis Antiqua (biovar Antiqua) 2006 RefSeq
ypn Yersinia pestis Nepal516 (biovar Antiqua) 2006 RefSeq
ypm Yersinia pestis 91001 (biovar Microtus) 2004 RefSeq
ypp Yersinia pestis Pestoides F 2007 RefSeq
ypg Yersinia pestis Angola 2007 RefSeq
ypz Yersinia pestis Z176003 2010 RefSeq
yps Yersinia pseudotuberculosis IP32953 (serotype I) 2004 RefSeq
ypi Yersinia pseudotuberculosis IP31758 (serotype O:1b) 2007 RefSeq
ypy Yersinia pseudotuberculosis YPIII 2008 RefSeq
ypb Yersinia pseudotuberculosis PB1/+ 2008 RefSeq
yen Yersinia enterocolitica 2007 RefSeq
Shigella sfl Shigella flexneri 301 (serotype 2a) 2002 RefSeq
sfx Shigella flexneri 2457T (serotype 2a) 2003 RefSeq
sfv Shigella flexneri 8401 (serotype 5b) 2006 RefSeq
ssn Shigella sonnei 2005 RefSeq
sbo Shigella boydii Sb227 2005 RefSeq
sbc Shigella boydii CDC 3083-94 2008 RefSeq
sdy Shigella dysenteriae 2005 RefSeq
Pectobacterium eca Erwinia carotovora 2004 RefSeq
pct Pectobacterium carotovorum 2009 RefSeq
pwa Pectobacterium wasabiae 2009 RefSeq
Erwinia eta Erwinia tasmaniensis 2008 RefSeq
epy Erwinia pyrifoliae 2009 RefSeq
eam Erwinia amylovora CFBP1430 2010 RefSeq
eay Erwinia amylovora ATCC 49946 2010 RefSeq
ebi Erwinia billingiae 2010 RefSeq
Photorhabdus plu Photorhabdus luminescens 2003 RefSeq
pay Photorhabdus asymbiotica 2009 RefSeq
Buchnera buc Buchnera aphidicola APS 2000 RefSeq
bas Buchnera aphidicola Sg 2002 RefSeq
bab Buchnera aphidicola Bp 2003 RefSeq
bcc Buchnera aphidicola Cc 2006 RefSeq
bap Buchnera aphidicola 5A 2009 RefSeq
bau Buchnera aphidicola Tuc7 2009 RefSeq
Wigglesworthia wbr Wigglesworthia glossinidia 2002 RefSeq
Sodalis sgl Sodalis glossinidius 2006 RefSeq
Enterobacter ent Enterobacter sp. 638 2007 RefSeq
enc Enterobacter cloacae 2010 RefSeq
Cronobacter esa Enterobacter sakazakii 2007 RefSeq
ctu Cronobacter turicensis 2009 RefSeq
Klebsiella kpn Klebsiella pneumoniae 2007 RefSeq
kpe Klebsiella pneumoniae 342 2008 RefSeq
kpu Klebsiella pneumoniae NTUH-K2044 2009 RefSeq
kva Klebsiella variicola 2010 RefSeq
Citrobacter cko Citrobacter koseri ATCC BAA-895 2007 RefSeq
cro Citrobacter rodentium 2010 RefSeq
Serratia spe Serratia proteamaculans 2007 RefSeq
Proteus pmr Proteus mirabilis 2008 RefSeq
Edwardsiella eic Edwardsiella ictaluri 2009 RefSeq
etr Edwardsiella tarda 2009 RefSeq
Blochmannia bfl Candidatus Blochmannia floridanus 2003 RefSeq
bpn Candidatus Blochmannia pennsylvanicus 2005 RefSeq
Hamiltonella hde Candidatus Hamiltonella defensa 2009 RefSeq
Dickeya dda Dickeya dadantii Ech703 2009 RefSeq
ddc Dickeya dadantii Ech586 2009 RefSeq
dze Dickeya zeae 2009 RefSeq
Xenorhabdus xbo Xenorhabdus bovienii 2010 RefSeq
xne Xenorhabdus nematophila 2010 RefSeq
Pantoea pam Pantoea ananatis 2010 RefSeq
Riesia rip Candidatus Riesia pediculicola 2010 RefSeq
Haemophilus hin Haemophilus influenzae Rd KW20 (serotype d) 1995 RefSeq
hit Haemophilus influenzae 86-028NP (nontypeable) 2005 RefSeq
hip Haemophilus influenzae PittEE 2007 RefSeq
hiq Haemophilus influenzae PittGG 2007 RefSeq
hdu Haemophilus ducreyi 2003 RefSeq
hap Haemophilus parasuis 2009 RefSeq
Histophilus hso Haemophilus somnus 129PT 2006 RefSeq
hsm Haemophilus somnus 2336 2008 RefSeq
Pasteurella pmu Pasteurella multocida 2001 RefSeq
Mannheimia msu Mannheimia succiniciproducens 2004 RefSeq
Actinobacillus apl Actinobacillus pleuropneumoniae L20 (serotype 5b) 2007 RefSeq
apj Actinobacillus pleuropneumoniae JL03 (serotype 3) 2008 RefSeq
apa Actinobacillus pleuropneumoniae AP76 (serotype 7) 2008 RefSeq
asu Actinobacillus succinogenes 2007 RefSeq
Aggregatibacter aap Aggregatibacter aphrophilus 2009 RefSeq
aat Aggregatibacter actinomycetemcomitans 2009 RefSeq
Xylella xfa Xylella fastidiosa 9a5c 2000 RefSeq
xft Xylella fastidiosa Temecula1 2003 RefSeq
xfm Xylella fastidiosa M12 2008 RefSeq
xfn Xylella fastidiosa M23 2008 RefSeq
Xanthomonas xcc Xanthomonas campestris pv. campestris ATCC 33913 2002 RefSeq
xcb Xanthomonas campestris pv. campestris 8004 2005 RefSeq
xca Xanthomonas campestris pv. campestris B100 2008 RefSeq
xcv Xanthomonas campestris pv. vesicatoria 2005 RefSeq
xac Xanthomonas axonopodis 2002 RefSeq
xoo Xanthomonas oryzae KACC10331 2005 RefSeq
xom Xanthomonas oryzae MAFF311018 2006 RefSeq
xop Xanthomonas oryzae PXO99A 2008 RefSeq
xal Xanthomonas albilineans 2010 RefSeq
Stenotrophomonas sml Stenotrophomonas maltophilia K279a 2008 RefSeq
smt Stenotrophomonas maltophilia R551-3 2008 RefSeq
Vibrio vch Vibrio cholerae O1 2000 RefSeq
vco Vibrio cholerae O395 2007 RefSeq
vcm Vibrio cholerae M66-2 2009 RefSeq
vcj Vibrio cholerae MJ-1236 2009 RefSeq
vvu Vibrio vulnificus CMCP6 2002 RefSeq
vvy Vibrio vulnificus YJ016 2003 RefSeq
vpa Vibrio parahaemolyticus 2003 RefSeq
vha Vibrio harveyi 2007 RefSeq
vsp Vibrio splendidus 2008 RefSeq
vex Vibrio sp. Ex25 2009 RefSeq
Aliivibrio vfi Vibrio fischeri 2005 RefSeq
vfm Vibrio fischeri MJ11 2008 RefSeq
vsa Aliivibrio salmonicida LFI1238 2008 RefSeq
Photobacterium ppr Photobacterium profundum 2004 RefSeq
Pseudomonas pae Pseudomonas aeruginosa PAO1 2000 RefSeq
pau Pseudomonas aeruginosa UCBPP-PA14 2006 RefSeq
pap Pseudomonas aeruginosa PA7 2007 RefSeq
pag Pseudomonas aeruginosa LESB58 2009 RefSeq
ppu Pseudomonas putida KT2440 2003 RefSeq
ppf Pseudomonas putida F1 2007 RefSeq
ppg Pseudomonas putida GB-1 2008 RefSeq
ppw Pseudomonas putida W619 2008 RefSeq
pst Pseudomonas syringae pv. tomato DC3000 2003 RefSeq
psb Pseudomonas syringae pv. syringae B728a 2005 RefSeq
psp Pseudomonas syringae pv. phaseolicola 1448A 2005 RefSeq
pfl Pseudomonas fluorescens Pf-5 2005 RefSeq
pfo Pseudomonas fluorescens Pf0-1 2005 RefSeq
pfs Pseudomonas fluorescens SBW25 2009 RefSeq
pen Pseudomonas entomophila 2006 RefSeq
pmy Pseudomonas mendocina 2007 RefSeq
psa Pseudomonas stutzeri 2007 RefSeq
Cellvibrio cja Cellvibrio japonicus 2008 RefSeq
Azotobacter avn Azotobacter vinelandii 2009 RefSeq
Psychrobacter par Psychrobacter arcticum 2005 RefSeq
pcr Psychrobacter cryohalolentis 2006 RefSeq
prw Psychrobacter sp. PRwf-1 2007 RefSeq
Acinetobacter aci Acinetobacter sp. ADP1 2004 RefSeq
acd Acinetobacter sp. DR1 2010 RefSeq
acb Acinetobacter baumannii ATCC 17978 2007 RefSeq
abm Acinetobacter baumannii SDF 2008 RefSeq
aby Acinetobacter baumannii AYE 2008 RefSeq
abc Acinetobacter baumannii ACICU 2008 RefSeq
abn Acinetobacter baumannii AB0057 2008 RefSeq
abb Acinetobacter baumannii AB307-0294 2008 RefSeq
Moraxella mct Moraxella catarrhalis 2010 RefSeq
Shewanella son Shewanella oneidensis 2002 RefSeq
sdn Shewanella denitrificans 2006 RefSeq
sfr Shewanella frigidimarina 2006 RefSeq
saz Shewanella amazonensis 2006 RefSeq
sbl Shewanella baltica OS155 2007 RefSeq
sbm Shewanella baltica OS185 2007 RefSeq
sbn Shewanella baltica OS195 2007 RefSeq
sbp Shewanella baltica OS223 2008 RefSeq
slo Shewanella loihica 2007 RefSeq
spc Shewanella putrefaciens 2007 RefSeq
sse Shewanella sediminis 2007 RefSeq
spl Shewanella pealeana 2007 RefSeq
she Shewanella sp. MR-4 2006 RefSeq
shm Shewanella sp. MR-7 2006 RefSeq
shn Shewanella sp. ANA-3 2006 RefSeq
shw Shewanella sp. W3-18-1 2007 RefSeq
shl Shewanella halifaxensis 2008 RefSeq
swd Shewanella woodyi ATCC 51908 2008 RefSeq
swp Shewanella piezotolerans WP3 2008 RefSeq
svo Shewanella violacea 2010 RefSeq
Idiomarina ilo Idiomarina loihiensis 2004 RefSeq
Colwellia cps Colwellia psychrerythraea 2005 RefSeq
Pseudoalteromonas pha Pseudoalteromonas haloplanktis 2005 RefSeq
pat Pseudoalteromonas atlantica 2006 RefSeq
Saccharophagus sde Saccharophagus degradans 2006 RefSeq
Marinobacter maq Marinobacter aquaeolei 2007 RefSeq
Alteromonas amc Alteromonas macleodii 2008 RefSeq
Psychromonas pin Psychromonas ingrahamii 2006 RefSeq
Teredinibacter ttu Teredinibacter turnerae 2009 RefSeq
Coxiella cbu Coxiella burnetii RSA 493 2003 RefSeq
cbs Coxiella burnetii RSA 331 2007 RefSeq
cbd Coxiella burnetii Dugway 5J108-111 2007 RefSeq
cbg Coxiella burnetii CbuG_Q212 2008 RefSeq
cbc Coxiella burnetii CbuK_Q154 2008 RefSeq
Legionella lpn Legionella pneumophila Philadelphia 1 2004 RefSeq
lpf Legionella pneumophila Lens 2004 RefSeq
lpp Legionella pneumophila Paris 2004 RefSeq
lpc Legionella pneumophila Corby 2007 RefSeq
lpa Legionella pneumophila 2300/99 Alcoy 2010 RefSeq
llo Legionella longbeachae 2010 RefSeq
Methylococcus mca Methylococcus capsulatus 2004 RefSeq
Francisella ftu Francisella tularensis subsp. tularensis SCHU S4 2004 RefSeq
ftf Francisella tularensis subsp. tularensis FSC 198 2006 RefSeq
ftw Francisella tularensis subsp. tularensis WY96-3418 2007 RefSeq
ftl Francisella tularensis subsp. holarctica LVS 2006 RefSeq
fth Francisella tularensis subsp. holarctica OSU18 2006 RefSeq
fta Francisella tularensis subsp. holarctica FTNF002-00 2007 RefSeq
ftm Francisella tularensis subsp. mediasiatica FSC147 2008 RefSeq
ftn Francisella novicida U112 2006 RefSeq
fph Francisella philomiragia 2008 RefSeq
Thiomicrospira tcx Thiomicrospira crunogena 2005 RefSeq
Nitrosococcus noc Nitrosococcus oceani 2005 RefSeq
nhl Nitrosococcus halophilus 2010 RefSeq
nwa Nitrosococcus watsoni 2010 RefSeq
Allochromatium alv Allochromatium vinosum 2010 RefSeq
Alkalilimnicola aeh Alkalilimnicola ehrlichei 2006 RefSeq
Halorhodospira hha Halorhodospira halophila 2007 RefSeq
Thioalkalivibrio tgr Thioalkalivibrio sp. HL-EbGR7 2009 RefSeq
tkm Thioalkalivibrio sp. K90mix 2010 RefSeq
Halothiobacillus hna Halothiobacillus neapolitanus 2009 RefSeq
Hahella hch Hahella chejuensis 2005 RefSeq
Chromohalobacter csa Chromohalobacter salexigens 2006 RefSeq
Alcanivorax abo Alcanivorax borkumensis 2006 RefSeq
Marinomonas mmw Marinomonas sp. MWYL1 2007 RefSeq
Aeromonas aha Aeromonas hydrophila 2006 RefSeq
asa Aeromonas salmonicida 2007 RefSeq
Tolumonas tau Tolumonas auensis 2009 RefSeq
Dichelobacter dno Dichelobacter nodosus 2007 RefSeq
Acidithiobacillus afe Acidithiobacillus ferrooxidans ATCC 53993 2008 RefSeq
afr Acidithiobacillus ferrooxidans ATCC 23270 2008 RefSeq
Baumannia bci Baumannia cicadellinicola 2006 RefSeq
Carsonella crp Candidatus Carsonella ruddii 2006 RefSeq
Ruthia rma Candidatus Ruthia magnifica 2006 RefSeq
Vesicomyosocius vok Candidatus Vesicomyosocius okutanii 2007 RefSeq
Kangiella kko Kangiella koreensis 2009 RefSeq
Unclassified gpb Gamma proteobacterium HdN1 2010 RefSeq
Betaproteobacteria Neisseria nma Neisseria meningitidis Z2491 (serogroup A) 2000 RefSeq
nme Neisseria meningitidis MC58 (serogroup B) 2000 RefSeq
nmc Neisseria meningitidis FAM18 (serogroup C) 2007 RefSeq
nmn Neisseria meningitidis 053442 (serogroup C) 2007 RefSeq
nmi Neisseria meningitidis alpha14 2009 RefSeq
ngo Neisseria gonorrhoeae FA 1090 2005 RefSeq
ngk Neisseria gonorrhoeae NCCP11945 2008 RefSeq
Chromobacterium cvi Chromobacterium violaceum 2003 RefSeq
Laribacter lhk Laribacter hongkongensis 2009 RefSeq
Ralstonia rso Ralstonia solanacearum GMI1000 2001 RefSeq
rsc Ralstonia solanacearum CFBP2957 2010 RefSeq
rsl Ralstonia solanacearum PSI07 2010 RefSeq
rpi Ralstonia pickettii 12J 2008 RefSeq
rpf Ralstonia pickettii 12D 2009 RefSeq
Cupriavidus reu Ralstonia eutropha JMP134 2005 RefSeq
reh Ralstonia eutropha H16 2006 RefSeq
rme Cupriavidus metallidurans 2006 RefSeq
cti Cupriavidus taiwanensis 2008 RefSeq
Burkholderia bma Burkholderia mallei ATCC 23344 2004 RefSeq
bmv Burkholderia mallei SAVP1 2007 RefSeq
bml Burkholderia mallei NCTC 10229 2007 RefSeq
bmn Burkholderia mallei NCTC 10247 2007 RefSeq
bps Burkholderia pseudomallei K96243 2004 RefSeq
bpm Burkholderia pseudomallei 1710b 2005 RefSeq
bpl Burkholderia pseudomallei 1106a 2007 RefSeq
bpd Burkholderia pseudomallei 668 2007 RefSeq
bpr Burkholderia pseudomallei MSHR346 2009 RefSeq
bte Burkholderia thailandensis 2005 RefSeq
bvi Burkholderia vietnamiensis 2007 RefSeq
bur Burkholderia sp. 383 2005 RefSeq
bcn Burkholderia cenocepacia AU1054 2006 RefSeq
bch Burkholderia cenocepacia HI2424 2006 RefSeq
bcm Burkholderia cenocepacia MC0-3 2008 RefSeq
bcj Burkholderia cenocepacia J2315 2008 RefSeq
bam Burkholderia cepacia 2006 RefSeq
bac Burkholderia ambifaria MC40-6 2008 RefSeq
bmu Burkholderia multivorans ATCC 17616 (JGI) 2007 RefSeq
bmj Burkholderia multivorans ATCC 17616 (Tohoku) 2008 RefSeq
bxe Burkholderia xenovorans 2006 RefSeq
bph Burkholderia phymatum 2008 RefSeq
bpy Burkholderia phytofirmans 2008 RefSeq
bgl Burkholderia glumae 2009 RefSeq
bge Burkholderia sp. CCGE1002 2010 RefSeq
Polynucleobacter pnu Polynucleobacter sp. QLW-P1DMWA-1 2007 RefSeq
pne Polynucleobacter necessarius 2008 RefSeq
Bordetella bpe Bordetella pertussis 2003 RefSeq
bpa Bordetella parapertussis 2003 RefSeq
bbr Bordetella bronchiseptica 2003 RefSeq
bpt Bordetella petrii 2007 RefSeq
bav Bordetella avium 2008 RefSeq
Rhodoferax rfr Rhodoferax ferrireducens 2006 RefSeq
Polaromonas pol Polaromonas sp. JS666 2006 RefSeq
pna Polaromonas naphthalenivorans 2007 RefSeq
Acidovorax aav Acidovorax avenae 2007 RefSeq
ajs Acidovorax sp. JS42 2007 RefSeq
dia Acidovorax ebreus 2009 RefSeq
Verminephrobacter vei Verminephrobacter eiseniae 2007 RefSeq
Delftia dac Delftia acidovorans 2007 RefSeq
Variovorax vap Variovorax paradoxus 2009 RefSeq
Comamonas ctt Comamonas testosteroni 2009 RefSeq
Methylibium mpt Methylibium petroleiphilum 2007 RefSeq
Herminiimonas har Herminiimonas arsenicoxydans 2007 RefSeq
Minibacterium mms Minibacterium massiliensis 2007 RefSeq
Herbaspirillum hse Herbaspirillum seropedicae 2010 RefSeq
Leptothrix lch Leptothrix cholodnii 2008 RefSeq
Thiomonas tin Thiomonas intermedia 2010 RefSeq
Nitrosomonas neu Nitrosomonas europaea 2003 RefSeq
net Nitrosomonas eutropha 2006 RefSeq
Nitrosospira nmu Nitrosospira multiformis 2005 RefSeq
Aromatoleum eba Aromatoleum aromaticum EbN1 2004 RefSeq
Azoarcus azo Azoarcus sp. BH72 2006 RefSeq
Dechloromonas dar Dechloromonas aromatica 2005 RefSeq
Thauera tmz Thauera sp. MZ1T 2008 RefSeq
Thiobacillus tbd Thiobacillus denitrificans 2005 RefSeq
Methylobacillus mfa Methylobacillus flagellatus 2006 RefSeq
Methylotenera mmb Methylotenera mobilis 2009 RefSeq
meh Methylotenera sp. 301 2010 RefSeq
Methylovorus mei Methylovorus sp. SIP3-4 2009 RefSeq
Accumulibacter app Accumulibacter phosphatis 2009 RefSeq
Sideroxydans slt Sideroxydans lithotrophicus 2010 RefSeq
Gallionella gca Gallionella capsiferriformans 2010 RefSeq
Epsilonproteobacteria Helicobacter hpy Helicobacter pylori 26695 1997 RefSeq
hpj Helicobacter pylori J99 1999 RefSeq
hpa Helicobacter pylori HPAG1 2006 RefSeq
hps Helicobacter pylori Shi470 2008 RefSeq
hpg Helicobacter pylori G27 2008 RefSeq
hpp Helicobacter pylori P12 2008 RefSeq
hpb Helicobacter pylori B38 2009 RefSeq
hpl Helicobacter pylori B8 2010 RefSeq
hhe Helicobacter hepaticus 2003 RefSeq
hac Helicobacter acinonychis 2006 RefSeq
hms Helicobacter mustelae 2010 RefSeq
Wolinella wsu Wolinella succinogenes 2003 RefSeq
Sulfurimonas tdn Sulfurimonas denitrificans 2005 RefSeq
Campylobacter cje Campylobacter jejuni NCTC11168 2000 RefSeq
cjr Campylobacter jejuni RM1221 2005 RefSeq
cjj Campylobacter jejuni 81-176 2007 RefSeq
cju Campylobacter jejuni 81116 2007 RefSeq
cjd Campylobacter jejuni subsp. doylei 269.97 2007 RefSeq
cff Campylobacter fetus 2006 RefSeq
ccv Campylobacter curvus 2007 RefSeq
cha Campylobacter hominis ATCC BAA-381 2007 RefSeq
cco Campylobacter concisus 13826 2007 RefSeq
cla Campylobacter lari 2009 RefSeq
Arcobacter abu Arcobacter butzleri 2007 RefSeq
ant Arcobacter nitrofigilis 2010 RefSeq
Sulfurospirillum sdl Sulfurospirillum deleyianum 2009 RefSeq
Nitratiruptor nis Nitratiruptor sp. SB155-2 2007 RefSeq
Sulfurovum sun Sulfurovum sp. NBC37-1 2007 RefSeq
Nautilia nam Nautilia profundicola 2009 RefSeq
Deltaproteobacteria Geobacter gsu Geobacter sulfurreducens 2003 RefSeq
gme Geobacter metallireducens 2005 RefSeq
gur Geobacter uraniumreducens 2007 RefSeq
glo Geobacter lovleyi 2008 RefSeq
gbm Geobacter bemidjiensis 2008 RefSeq
geo Geobacter sp. FRC-32 2009 RefSeq
gem Geobacter sp. M21 2009 RefSeq
Pelobacter pca Pelobacter carbinolicus 2005 RefSeq
ppd Pelobacter propionicus 2006 RefSeq
Desulfovibrio dvu Desulfovibrio vulgaris Hildenborough 2004 RefSeq
dvl Desulfovibrio vulgaris DP4 2007 RefSeq
dvm Desulfovibrio vulgaris Miyazaki F 2009 RefSeq
dde Desulfovibrio desulfuricans G20 2005 RefSeq
dds Desulfovibrio desulfuricans ATCC 27774 2009 RefSeq
dma Desulfovibrio magneticus 2009 RefSeq
dsa Desulfovibrio salexigens 2009 RefSeq
Lawsonia lip Lawsonia intracellularis 2006 RefSeq
Desulfomicrobium dba Desulfomicrobium baculatum 2009 RefSeq
Desulfohalobium drt Desulfohalobium retbaense 2009 RefSeq
Bdellovibrio bba Bdellovibrio bacteriovorus 2004 RefSeq
Desulfotalea dps Desulfotalea psychrophila 2004 RefSeq
Desulfurivibrio dak Desulfurivibrio alkaliphilus 2010 RefSeq
Desulfococcus dol Desulfococcus oleovorans 2007 RefSeq
Desulfatibacillum dal Desulfatibacillum alkenivorans 2009 RefSeq
Desulfobacterium dat Desulfobacterium autotrophicum 2009 RefSeq
Anaeromyxobacter ade Anaeromyxobacter dehalogenans 2CP-C 2006 RefSeq
acp Anaeromyxobacter dehalogenans 2CP-1 2009 RefSeq
afw Anaeromyxobacter sp. Fw109-5 2007 RefSeq
ank Anaeromyxobacter sp. K 2008 RefSeq
Myxococcus mxa Myxococcus xanthus 2006 RefSeq
Sorangium scl Sorangium cellulosum 2007 RefSeq
Haliangium hoh Haliangium ochraceum 2009 RefSeq
Syntrophus sat Syntrophus aciditrophicus 2006 RefSeq
Syntrophobacter sfu Syntrophobacter fumaroxidans 2006 RefSeq
Desulfarculus dbr Desulfarculus baarsii 2010 RefSeq
Alphaproteobacteria Rickettsia rpr Rickettsia prowazekii 1998 RefSeq
rty Rickettsia typhi 2004 RefSeq
rcm Rickettsia canadensis 2007 RefSeq
rco Rickettsia conorii 2001 RefSeq
rfe Rickettsia felis 2005 RefSeq
rak Rickettsia akari 2007 RefSeq
rri Rickettsia rickettsii Sheila Smith 2007 RefSeq
rrj Rickettsia rickettsii Iowa 2008 RefSeq
rms Rickettsia massiliae 2007 RefSeq
rpk Rickettsia peacockii 2009 RefSeq
raf Rickettsia africae 2009 RefSeq
rbe Rickettsia bellii RML369-C 2006 RefSeq
rbo Rickettsia bellii OSU 85-389 2007 RefSeq
Orientia ots Orientia tsutsugamushi Boryong 2007 RefSeq
ott Orientia tsutsugamushi Ikeda 2008 RefSeq
Wolbachia wol Wolbachia wMel 2004 RefSeq
wbm Wolbachia wBm 2005 RefSeq
wri Wolbachia sp. wRi 2009 RefSeq
wpi Wolbachia pipientis 2008 RefSeq
Anaplasma ama Anaplasma marginale St. Maries 2004 RefSeq
amf Anaplasma marginale Florida 2009 RefSeq
acn Anaplasma centrale 2009 RefSeq
aph Anaplasma phagocytophilum 2006 RefSeq
Ehrlichia eru Ehrlichia ruminantium Welgevonden (South Africa) 2005 RefSeq
erw Ehrlichia ruminantium Welgevonden (France) 2005 RefSeq
erg Ehrlichia ruminantium Gardel 2005 RefSeq
ecn Ehrlichia canis 2005 RefSeq
ech Ehrlichia chaffeensis 2006 RefSeq
Neorickettsia nse Neorickettsia sennetsu 2006 RefSeq
nri Neorickettsia risticii 2009 RefSeq
Pelagibacter pub Candidatus Pelagibacter ubique 2005 RefSeq
Mesorhizobium mlo Mesorhizobium loti 2000 RefSeq
Chelativorans mes Mesorhizobium sp. BNC1 2006 RefSeq
Parvibaculum pla Parvibaculum lavamentivorans 2007 RefSeq
Sinorhizobium sme Sinorhizobium meliloti 2001 RefSeq
smd Sinorhizobium medicae 2007 RefSeq
Agrobacterium atu Agrobacterium tumefaciens C58 2001 RefSeq
ara Agrobacterium radiobacter K84 2009 RefSeq
avi Agrobacterium vitis S4 2009 RefSeq
Rhizobium ret Rhizobium etli CFN 42 2006 RefSeq
rec Rhizobium etli CIAT 652 2008 RefSeq
rle Rhizobium leguminosarum 2006 RefSeq
rlt Rhizobium leguminosarum bv. trifolii WSM2304 2008 RefSeq
rlg Rhizobium leguminosarum bv. trifolii WSM1325 2009 RefSeq
rhi Rhizobium sp. NGR234 2009 RefSeq
Liberibacter las Candidatus Liberibacter asiaticus 2009 RefSeq
Brucella bme Brucella melitensis 16M 2002 RefSeq
bmi Brucella melitensis ATCC 23457 2009 RefSeq
bmf Brucella melitensis biovar Abortus 2005 RefSeq
bmb Brucella abortus 9-941 2005 RefSeq
bmc Brucella abortus S19 2008 RefSeq
bms Brucella suis 1330 2002 RefSeq
bmt Brucella suis ATCC 23445 2007 RefSeq
bov Brucella ovis 2007 RefSeq
bcs Brucella canis 2007 RefSeq
bmr Brucella microti 2009 RefSeq
Ochrobactrum oan Ochrobactrum anthropi 2007 RefSeq
Bradyrhizobium bja Bradyrhizobium japonicum 2002 RefSeq
bra Bradyrhizobium sp. ORS278 2007 RefSeq
bbt Bradyrhizobium sp. BTAi1 2007 RefSeq
Rhodopseudomonas rpa Rhodopseudomonas palustris CGA009 2003 RefSeq
rpb Rhodopseudomonas palustris HaA2 2006 RefSeq
rpc Rhodopseudomonas palustris BisB18 2006 RefSeq
rpd Rhodopseudomonas palustris BisB5 2006 RefSeq
rpe Rhodopseudomonas palustris BisA53 2006 RefSeq
rpt Rhodopseudomonas palustris TIE-1 2008 RefSeq
Nitrobacter nwi Nitrobacter winogradskyi 2005 RefSeq
nha Nitrobacter hamburgensis 2006 RefSeq
Oligotropha oca Oligotropha carboxidovorans 2008 RefSeq
Bartonella bhe Bartonella henselae 2004 RefSeq
bqu Bartonella quintana 2004 RefSeq
bbk Bartonella bacilliformis 2007 RefSeq
btr Bartonella tribocorum 2007 RefSeq
bgr Bartonella grahamii 2009 RefSeq
Xanthobacter xau Xanthobacter autotrophicus 2007 RefSeq
Azorhizobium azc Azorhizobium caulinodans 2007 RefSeq
Starkeya sno Starkeya novella 2010 RefSeq
Methylobacterium mex Methylobacterium extorquens 2007 RefSeq
mea Methylobacterium extorquens AM1 2009 RefSeq
mdi Methylobacterium extorquens DM4 2009 RefSeq
mrd Methylobacterium radiotolerans 2008 RefSeq
met Methylobacterium sp. 4-46 2008 RefSeq
mpo Methylobacterium populi 2008 RefSeq
mch Methylobacterium chloromethanicum 2008 RefSeq
mno Methylobacterium nodulans 2009 RefSeq
Beijerinckia bid Beijerinckia indica 2008 RefSeq
Methylocella msl Methylocella silvestris 2008 RefSeq
Hyphomicrobium hdn Hyphomicrobium denitrificans 2010 RefSeq
Hodgkinia hci Candidatus Hodgkinia cicadicola 2009 RefSeq
Caulobacter ccr Caulobacter crescentus CB15 2001 RefSeq
ccs Caulobacter crescentus NA1000 2009 RefSeq
cak Caulobacter sp. K31 2008 RefSeq
cse Caulobacter segnis 2010 RefSeq
Phenylobacterium pzu Phenylobacterium zucineum 2008 RefSeq
Brevundimonas bsb Brevundimonas subvibrioides 2010 RefSeq
Ruegeria sil Silicibacter pomeroyi 2004 RefSeq
sit Silicibacter sp. TM1040 2006 RefSeq
Rhodobacter rsp Rhodobacter sphaeroides 2.4.1 2005 RefSeq
rsh Rhodobacter sphaeroides ATCC 17029 2007 RefSeq
rsq Rhodobacter sphaeroides ATCC 17025 2007 RefSeq
rsk Rhodobacter sphaeroides KD131 2009 RefSeq
rcp Rhodobacter capsulatus 2010 RefSeq
Jannaschia jan Jannaschia sp. CCS1 2006 RefSeq
Roseobacter rde Roseobacter denitrificans 2006 RefSeq
Paracoccus pde Paracoccus denitrificans 2006 RefSeq
Dinoroseobacter dsh Dinoroseobacter shibae 2007 RefSeq
Maricaulis mmr Maricaulis maris 2006 RefSeq
Hyphomonas hne Hyphomonas neptunium 2006 RefSeq
Hirschia hba Hirschia baltica 2009 RefSeq
Zymomonas zmo Zymomonas mobilis 2004 RefSeq
zmn Zymomonas mobilis subsp. mobilis NCIMB 11163 2009 RefSeq
Novosphingobium nar Novosphingobium aromaticivorans 2006 RefSeq
Sphingopyxis sal Sphingopyxis alaskensis 2006 RefSeq
Sphingomonas swi Sphingomonas wittichii 2007 RefSeq
Sphingobium sjp Sphingobium japonicum 2010 RefSeq
Erythrobacter eli Erythrobacter litoralis 2006 RefSeq
Gluconobacter gox Gluconobacter oxydans 2005 RefSeq
Granulobacter gbe Granulibacter bethesdensis 2006 RefSeq
Acidiphilium acr Acidiphilium cryptum JF-5 2007 RefSeq
Gluconacetobacter gdi Gluconacetobacter diazotrophicus PAl 5 (Brazil) 2007 RefSeq
gdj Gluconacetobacter diazotrophicus PAl 5 (JGI) 2008 RefSeq
Acetobacter apt Acetobacter pasteurianus 2009 RefSeq
Rhodospirillum rru Rhodospirillum rubrum 2005 RefSeq
rce Rhodospirillum centenum 2008 RefSeq
Magnetospirillum mag Magnetospirillum magneticum 2005 RefSeq
Azospirillum azl Azospirillum sp. B510 2010 RefSeq
Parvularcula pbr Parvularcula bermudensis 2010 RefSeq
Unclassified apb Alpha proteobacterium IMCC1322 2010 RefSeq
Other proteobacteria Magnetococcus mgm Magnetococcus sp. MC-1 2006 RefSeq
Firmicutes Bacillus bsu Bacillus subtilis 1997 RefSeq
bha Bacillus halodurans 2000 RefSeq
ban Bacillus anthracis Ames 2003 RefSeq
bar Bacillus anthracis Ames 0581 2004 RefSeq
bat Bacillus anthracis Sterne 2004 RefSeq
bah Bacillus anthracis CDC 684 2009 RefSeq
bai Bacillus anthracis A0248 2009 RefSeq
bal Bacillus anthracis CI 2010 RefSeq
bce Bacillus cereus ATCC 14579 2003 RefSeq
bca Bacillus cereus ATCC 10987 2004 RefSeq
bcz Bacillus cereus ZK 2004 RefSeq
bcr Bacillus cereus AH187 2008 RefSeq
bcb Bacillus cereus B4264 2008 RefSeq
bcu Bacillus cereus AH820 2009 RefSeq
bcg Bacillus cereus G9842 2009 RefSeq
bcq Bacillus cereus Q1 2009 RefSeq
bcx Bacillus cereus 03BB102 2009 RefSeq
bcy Bacillus cytotoxis NVH 391-98 2007 RefSeq
btk Bacillus thuringiensis 97-27 2004 RefSeq
btl Bacillus thuringiensis Al Hakam 2006 RefSeq
btb Bacillus thuringiensis BMB171 2010 RefSeq
bwe Bacillus weihenstephanensis 2008 RefSeq
bli Bacillus licheniformis ATCC 14580 2004 RefSeq
bld Bacillus licheniformis DSM13 2004 RefSeq
bcl Bacillus clausii 2005 RefSeq
bay Bacillus amyloliquefaciens 2007 RefSeq
bpu Bacillus pumilus 2007 RefSeq
bpf Bacillus pseudofirmus 2010 RefSeq
bmq Bacillus megaterium QM B1551 2010 RefSeq
bmd Bacillus megaterium DSM319 2010 RefSeq
bse Bacillus selenitireducens 2010 RefSeq
Oceanobacillus oih Oceanobacillus iheyensis 2002 RefSeq
Geobacillus gka Geobacillus kaustophilus 2004 RefSeq
gtn Geobacillus thermodenitrificans 2007 RefSeq
gwc Geobacillus sp. WCH70 2009 RefSeq
gym Geobacillus sp. Y412MC10 2009 RefSeq
gyc Geobacillus sp. Y412MC61 2009 RefSeq
gct Geobacillus sp. C56-T3 2010 RefSeq
Anoxybacillus afl Anoxybacillus flavithermus 2008 RefSeq
Staphylococcus sau Staphylococcus aureus N315 (MRSA/VSSA) 2001 RefSeq
sav Staphylococcus aureus Mu50 (MRSA/VISA) 2001 RefSeq
saw Staphylococcus aureus Mu3 (MRSA/hetero-VISA) 2007 RefSeq
sah Staphylococcus aureus JH1 (MRSA/VSSA) 2007 RefSeq
saj Staphylococcus aureus JH9 (MRSA/VRSA) 2007 RefSeq
sam Staphylococcus aureus MW2 (CA-MRSA) 2002 RefSeq
sas Staphylococcus aureus MSSA476 (MSSA) 2004 RefSeq
sar Staphylococcus aureus MRSA252 (MRSA) 2004 RefSeq
sac Staphylococcus aureus COL (MRSA) 2005 RefSeq
sax Staphylococcus aureus USA300_TCH1516 (CA-MSSA) 2007 RefSeq
saa Staphylococcus aureus USA300_FPR3757 (CA-MRSA) 2006 RefSeq
sao Staphylococcus aureus NCTC8325 2006 RefSeq
sae Staphylococcus aureus Newman 2007 RefSeq
sad Staphylococcus aureus ED98 2009 RefSeq
sab Staphylococcus aureus RF122 2005 RefSeq
sep Staphylococcus epidermidis ATCC 12228 2003 RefSeq
ser Staphylococcus epidermidis RP62A 2005 RefSeq
sha Staphylococcus haemolyticus 2005 RefSeq
ssp Staphylococcus saprophyticus 2005 RefSeq
sca Staphylococcus carnosus 2009 RefSeq
slg Staphylococcus lugdunensis 2010 RefSeq
Listeria lmo Listeria monocytogenes EGD-e 2001 RefSeq
lmf Listeria monocytogenes F2365 2004 RefSeq
lmh Listeria monocytogenes HCC23 2008 RefSeq
lmc Listeria monocytogenes Clip81459 2009 RefSeq
lmn Listeria monocytogenes 08-5578 2010 RefSeq
lmy Listeria monocytogenes 08-5923 2010 RefSeq
lin Listeria innocua 2001 RefSeq
lwe Listeria welshimeri SLCC5334 2006 RefSeq
lsg Listeria seeligeri 2010 RefSeq
Lysinibacillus lsp Lysinibacillus sphaericus 2008 RefSeq
Exiguobacterium esi Exiguobacterium sibiricum 2008 RefSeq
eat Exiguobacterium sp. AT1b 2009 RefSeq
Macrococcus mcl Macrococcus caseolyticus 2009 RefSeq
Brevibacillus bbe Brevibacillus brevis 2009 RefSeq
Paenibacillus pjd Paenibacillus sp. JDR-2 2009 RefSeq
Alicyclobacillus aac Alicyclobacillus acidocaldarius 2009 RefSeq
Unclassified Alicyclobacillaceae bts Bacillus tusciae 2010 RefSeq
Lactococcus lla Lactococcus lactis subsp. lactis IL1403 2001 RefSeq
llk Lactococcus lactis subsp. lactis KF147 2009 RefSeq
llc Lactococcus lactis subsp. cremoris SK11 2006 RefSeq
llm Lactococcus lactis subsp. cremoris MG1363 2007 RefSeq
Streptococcus spy Streptococcus pyogenes SF370 (serotype M1) 2001 RefSeq
spz Streptococcus pyogenes MGAS5005 (serotype M1) 2005 RefSeq
spm Streptococcus pyogenes MGAS8232 (serotype M18) 2002 RefSeq
spg Streptococcus pyogenes MGAS315 (serotype M3) 2002 RefSeq
sps Streptococcus pyogenes SSI-1 (serotype M3) 2003 RefSeq
sph Streptococcus pyogenes MGAS10270 (serotype M2) 2006 RefSeq
spi Streptococcus pyogenes MGAS10750 (serotype M4) 2006 RefSeq
spj Streptococcus pyogenes MGAS2096 (serotype M12) 2006 RefSeq
spk Streptococcus pyogenes MGAS9429 (serotype M12) 2006 RefSeq
spf Streptococcus pyogenes Manfredo (serotype M5) 2007 RefSeq
spa Streptococcus pyogenes MGAS10394 (serotype M6) 2004 RefSeq
spb Streptococcus pyogenes MGAS6180 (serotype M28) 2005 RefSeq
soz Streptococcus pyogenes NZ131 (serotype M49) 2008 RefSeq
spn Streptococcus pneumoniae TIGR4 (virulent serotype 4) 2001 RefSeq
spd Streptococcus pneumoniae D39 (virulent serotype 2) 2006 RefSeq
spr Streptococcus pneumoniae R6 (avirulent) 2001 RefSeq
spw Streptococcus pneumoniae CGSP14 (serotype 14) 2008 RefSeq
spx Streptococcus pneumoniae G54 (serotype 19F) 2008 RefSeq
sne Streptococcus pneumoniae ATCC 700669 (serotype 23F ST81 lineage) 2009 RefSeq
spv Streptococcus pneumoniae Hungary19A 6 2008 RefSeq
snm Streptococcus pneumoniae 70585 2009 RefSeq
sjj Streptococcus pneumoniae JJA 2009 RefSeq
spp Streptococcus pneumoniae P1031 2009 RefSeq
snt Streptococcus pneumoniae Taiwan19F-14 2009 RefSeq
snc Streptococcus pneumoniae TCH8431/19A 2010 RefSeq
sag Streptococcus agalactiae 2603 (serotype V) 2002 RefSeq
san Streptococcus agalactiae NEM316 (serotype III) 2002 RefSeq
sak Streptococcus agalactiae A909 (serotype Ia) 2005 RefSeq
smu Streptococcus mutans UA159 2002 RefSeq
smc Streptococcus mutans NN2025 2010 RefSeq
stc Streptococcus thermophilus CNRZ1066 2004 RefSeq
stl Streptococcus thermophilus LMG18311 2004 RefSeq
ste Streptococcus thermophilus LMD-9 2006 RefSeq
ssa Streptococcus sanguinis 2007 RefSeq
ssu Streptococcus suis 05ZYH33 2007 RefSeq
ssv Streptococcus suis 98HAH33 2007 RefSeq
ssb Streptococcus suis BM407 2009 RefSeq
ssi Streptococcus suis P1/7 2009 RefSeq
sss Streptococcus suis SC84 2009 RefSeq
sgo Streptococcus gordonii 2007 RefSeq
seq Streptococcus equi subsp. zooepidemicus H70 2009 RefSeq
sez Streptococcus equi subsp. zooepidemicus MGCS10565 2008 RefSeq
seu Streptococcus equi subsp. equi 4047 2009 RefSeq
sub Streptococcus uberis 2009 RefSeq
sds Streptococcus dysgalactiae 2009 RefSeq
sga Streptococcus gallolyticus 2010 RefSeq
smb Streptococcus mitis B6 2010 RefSeq
Lactobacillus lpl Lactobacillus plantarum WCFS1 2003 RefSeq
lpj Lactobacillus plantarum JDM1 2009 RefSeq
ljo Lactobacillus johnsonii NCC 533 2004 RefSeq
ljf Lactobacillus johnsonii FI9785 2009 RefSeq
lac Lactobacillus acidophilus 2005 RefSeq
lsa Lactobacillus sakei 2005 RefSeq
lsl Lactobacillus salivarius 2006 RefSeq
ldb Lactobacillus delbrueckii ATCC 11842 2006 RefSeq
lbu Lactobacillus delbrueckii ATCC BAA-365 2006 RefSeq
lbr Lactobacillus brevis 2006 RefSeq
lca Lactobacillus casei ATCC 334 2006 RefSeq
lcb Lactobacillus casei BL23 2008 RefSeq
lcz Lactobacillus casei Zhang 2010 RefSeq
lga Lactobacillus gasseri 2006 RefSeq
lre Lactobacillus reuteri DSM 20016 2007 RefSeq
lrf Lactobacillus reuteri JCM 1112 2008 RefSeq
lhe Lactobacillus helveticus 2007 RefSeq
lfe Lactobacillus fermentum 2008 RefSeq
lrh Lactobacillus rhamnosus GG 2009 RefSeq
lrl Lactobacillus rhamnosus Lc 705 2009 RefSeq
lcr Lactobacillus crispatus 2010 RefSeq
Pediococcus ppe Pediococcus pentosaceus 2006 RefSeq
Enterococcus efa Enterococcus faecalis 2003 RefSeq
Oenococcus ooe Oenococcus oeni 2006 RefSeq
Leuconostoc lme Leuconostoc mesenteroides 2006 RefSeq
lci Leuconostoc citreum 2008 RefSeq
lki Leuconostoc kimchii 2010 RefSeq
lgs Leuconostoc gasicomitatum 2010 RefSeq
Clostridium cac Clostridium acetobutylicum 2001 RefSeq
cpe Clostridium perfringens 13 2002 RefSeq
cpf Clostridium perfringens ATCC 13124 2006 RefSeq
cpr Clostridium perfringens SM101 2006 RefSeq
ctc Clostridium tetani E88 2003 RefSeq
cno Clostridium novyi 2006 RefSeq
cth Clostridium thermocellum 2007 RefSeq
cdf Clostridium difficile 630 2007 RefSeq
cdc Clostridium difficile CD196 2009 RefSeq
cdl Clostridium difficile R20291 2009 RefSeq
cbo Clostridium botulinum A ATCC 3502 2007 RefSeq
cba Clostridium botulinum A ATCC 19397 2007 RefSeq
cbh Clostridium botulinum A Hall 2007 RefSeq
cby Clostridium botulinum A2 2009 RefSeq
cbl Clostridium botulinum A3 Loch Maree 2008 RefSeq
cbk Clostridium botulinum B Eklund 17B 2008 RefSeq
cbb Clostridium botulinum B1 Okra 2008 RefSeq
cbi Clostridium botulinum Ba4 2009 RefSeq
cbt Clostridium botulinum E3 2008 RefSeq
cbf Clostridium botulinum F Langeland 2007 RefSeq
cbe Clostridium beijerinckii 2007 RefSeq
ckl Clostridium kluyveri DSM 555 2007 RefSeq
ckr Clostridium kluyveri NBRC 12016 2009 RefSeq
cpy Clostridium phytofermentans 2007 RefSeq
cce Clostridium cellulolyticum 2009 RefSeq
clj Clostridium ljungdahlii 2010 RefSeq
csh Clostridium saccharolyticum 2010 RefSeq
ccb Clostridium cellulovorans 2010 RefSeq
Alkaliphilus amt Alkaliphilus metalliredigens 2007 RefSeq
aoe Alkaliphilus oremlandii 2007 RefSeq
Symbiobacterium sth Symbiobacterium thermophilum 2004 RefSeq
Syntrophomonas swo Syntrophomonas wolfei 2006 RefSeq
Syntrophothermus slp Syntrophothermus lipocalidus 2010 RefSeq
Veillonella vpr Veillonella parvula 2009 RefSeq
Acidaminococcus afn Acidaminococcus fermentans 2010 RefSeq
Anaerocellum ate Anaerocellum thermophilum 2009 RefSeq
Desulfitobacterium dsy Desulfitobacterium hafniense Y51 2006 RefSeq
dhd Desulfitobacterium hafniense DCB-2 2009 RefSeq
Desulfotomaculum drm Desulfotomaculum reducens 2007 RefSeq
dae Desulfotomaculum acetoxidans 2009 RefSeq
Pelotomaculum pth Pelotomaculum thermopropionicum 2007 RefSeq
Desulforudis dau Candidatus Desulforudis audaxviator 2008 RefSeq
Thermincola tjr Thermincola potens JR 2010 RefSeq
Heliobacterium hmo Heliobacterium modesticaldum 2008 RefSeq
Finegoldia fma Finegoldia magna 2008 RefSeq
Anaerococcus apr Anaerococcus prevotii 2009 RefSeq
Eubacterium eel Eubacterium eligens 2009 RefSeq
ere Eubacterium rectale 2009 RefSeq
Butyrivibrio bpb Butyrivibrio proteoclasticus 2010 RefSeq
Unclassified Clostridiales clo Clostridiales genomosp. BVAB3 2010 RefSeq
Thermoanaerobacter tte Thermoanaerobacter tengcongensis 2002 RefSeq
tex Thermoanaerobacter sp. X514 2008 RefSeq
tpd Thermoanaerobacter pseudethanolicus 2008 RefSeq
tit Thermoanaerobacter italicus 2010 RefSeq
tmt Thermoanaerobacter mathranii 2010 RefSeq
Carboxydothermus chy Carboxydothermus hydrogenoformans 2005 RefSeq
Moorella mta Moorella thermoacetica 2005 RefSeq
Ammonifex adg Ammonifex degensii 2009 RefSeq
Caldicellulosiruptor csc Caldicellulosiruptor saccharolyticus 2007 RefSeq
cob Caldicellulosiruptor obsidiansis 2010 RefSeq
Thermosediminibacter toc Thermosediminibacter oceani 2010 RefSeq
Thermoanaerobacterium ttm Thermoanaerobacterium thermosaccharolyticum 2010 RefSeq
Coprothermobacter cpo Coprothermobacter proteolyticus 2008 RefSeq
Natranaerobius nth Natranaerobius thermophilus 2008 RefSeq
Halothermothrix hor Halothermothrix orenii 2009 RefSeq
Acetohalobium aar Acetohalobium arabaticum 2010 RefSeq
Tenericutes Mycoplasma mge Mycoplasma genitalium 1995 RefSeq
mpn Mycoplasma pneumoniae 1997 RefSeq
mpu Mycoplasma pulmonis 2001 RefSeq
mpe Mycoplasma penetrans 2002 RefSeq
mga Mycoplasma gallisepticum 2003 RefSeq
mmy Mycoplasma mycoides 2004 RefSeq
mmo Mycoplasma mobile 2004 RefSeq
mhy Mycoplasma hyopneumoniae 232 2004 RefSeq
mhj Mycoplasma hyopneumoniae J 2005 RefSeq
mhp Mycoplasma hyopneumoniae 7448 2005 RefSeq
msy Mycoplasma synoviae 2005 RefSeq
mcp Mycoplasma capricolum 2005 RefSeq
maa Mycoplasma agalactiae PG2 2007 RefSeq
mal Mycoplasma agalactiae 5632 2010 RefSeq
mat Mycoplasma arthritidis 2008 RefSeq
mco Mycoplasma conjunctivae 2009 RefSeq
mho Mycoplasma hominis 2009 RefSeq
mcd Mycoplasma crocodyli 2010 RefSeq
mhr Mycoplasma hyorhinis 2010 RefSeq
Ureaplasma uur Ureaplasma parvum serovar 3 ATCC 700970 2000 RefSeq
upa Ureaplasma parvum serovar 3 ATCC 27815 2008 RefSeq
uue Ureaplasma urealyticum serovar 10 ATCC 33699 2008 RefSeq
Phytoplasma poy Phytoplasma OY 2003 RefSeq
ayw Phytoplasma AYWB 2006 RefSeq
pml Candidatus Phytoplasma mali 2008 RefSeq
pal Candidatus Phytoplasma australiense 2008 RefSeq
Acholeplasma acl Acholeplasma laidlawii 2008 RefSeq
Mesoplasma mfl Mesoplasma florum 2004 RefSeq
Actinobacteria Mycobacterium mtu Mycobacterium tuberculosis H37Rv 1998 RefSeq
mtc Mycobacterium tuberculosis CDC1551 2001 RefSeq
mra Mycobacterium tuberculosis H37Ra 2007 RefSeq
mtf Mycobacterium tuberculosis F11 2007 RefSeq
mtb Mycobacterium tuberculosis KZN 1435 2009 RefSeq
mbo Mycobacterium bovis AF2122/97 2003 RefSeq
mbb Mycobacterium bovis BCG Pasteur 1173P2 2007 RefSeq
mbt Mycobacterium bovis BCG Tokyo 172 2009 RefSeq
mle Mycobacterium leprae TN 2001 RefSeq
mlb Mycobacterium leprae Br4923 2009 RefSeq
mpa Mycobacterium avium paratuberculosis 2004 RefSeq
mav Mycobacterium avium 104 2006 RefSeq
msm Mycobacterium smegmatis 2006 RefSeq
mul Mycobacterium ulcerans 2006 RefSeq
mva Mycobacterium vanbaalenii 2006 RefSeq
mgi Mycobacterium gilvum 2007 RefSeq
mab Mycobacterium abscessus ATCC 19977 2008 RefSeq
mmc Mycobacterium sp. MCS 2006 RefSeq
mkm Mycobacterium sp. KMS 2006 RefSeq
mjl Mycobacterium sp. JLS 2007 RefSeq
mmi Mycobacterium marinum M 2008 RefSeq
Corynebacterium cgl Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) 2002 RefSeq
cgb Corynebacterium glutamicum ATCC 13032 (Bielefeld) 2005 RefSeq
cgt Corynebacterium glutamicum R 2007 RefSeq
cef Corynebacterium efficiens 2002 RefSeq
cdi Corynebacterium diphtheriae 2003 RefSeq
cjk Corynebacterium jeikeium 2005 RefSeq
cur Corynebacterium urealyticum 2008 RefSeq
car Corynebacterium aurimucosum 2009 RefSeq
ckp Corynebacterium kroppenstedtii 2009 RefSeq
cpu Corynebacterium pseudotuberculosis 2010 RefSeq
Nocardia nfa Nocardia farcinica 2004 RefSeq
Rhodococcus rha Rhodococcus sp. RHA1 2006 RefSeq
rer Rhodococcus erythropolis 2009 RefSeq
rop Rhodococcus opacus 2009 RefSeq
Gordonia gbr Gordonia bronchialis 2009 RefSeq
Tsukamurella tpr Tsukamurella paurometabola 2010 RefSeq
Segniliparus srt Segniliparus rotundus 2010 RefSeq
Streptomyces sco Streptomyces coelicolor 2002 RefSeq
sma Streptomyces avermitilis 2003 RefSeq
sgr Streptomyces griseus 2008 RefSeq
scb Streptomyces scabiei 2010 RefSeq
Tropheryma twh Tropheryma whipplei Twist 2003 RefSeq
tws Tropheryma whipplei TW08/27 2003 RefSeq
Leifsonia lxx Leifsonia xyli xyli CTCB07 2004 RefSeq
Clavibacter cmi Clavibacter michiganensis subsp. michiganensis 2007 RefSeq
cms Clavibacter michiganensis subsp. sepedonicus 2008 RefSeq
Arthrobacter art Arthrobacter sp. FB24 2006 RefSeq
aau Arthrobacter aurescens 2006 RefSeq
ach Arthrobacter chlorophenolicus 2009 RefSeq
Renibacterium rsa Renibacterium salmoninarum 2007 RefSeq
Kocuria krh Kocuria rhizophila 2008 RefSeq
Micrococcus mlu Micrococcus luteus 2009 RefSeq
Rothia rmu Rothia mucilaginosa 2010 RefSeq
Beutenbergia bcv Beutenbergia cavernae 2009 RefSeq
Brachybacterium bfa Brachybacterium faecium 2009 RefSeq
Jonesia jde Jonesia denitrificans 2009 RefSeq
Kytococcus kse Kytococcus sedentarius 2009 RefSeq
Xylanimonas xce Xylanimonas cellulosilytica 2009 RefSeq
Sanguibacter ske Sanguibacter keddieii 2010 RefSeq
Cellulomonas cfl Cellulomonas flavigena 2010 RefSeq
Propionibacterium pac Propionibacterium acnes KPA171202 2004 RefSeq
pak Propionibacterium acnes SK137 2010 RefSeq
pfr Propionibacterium freudenreichii 2010 RefSeq
Nocardioides nca Nocardioides sp. JS614 2006 RefSeq
Kribbella kfl Kribbella flavida 2010 RefSeq
Thermobifida tfu Thermobifida fusca 2005 RefSeq
Nocardiopsis nda Nocardiopsis dassonvillei 2010 RefSeq
Thermomonospora tcu Thermomonospora curvata 2009 RefSeq
Streptosporangium sro Streptosporangium roseum 2009 RefSeq
Frankia fra Frankia sp. CcI3 2006 RefSeq
fre Frankia sp. EAN1pec 2007 RefSeq
fal Frankia alni 2006 RefSeq
Acidothermus ace Acidothermus cellulolyticus 2006 RefSeq
Nakamurella nml Nakamurella multipartita 2009 RefSeq
Geodermatophilus gob Geodermatophilus obscurus 2010 RefSeq
Kineococcus kra Kineococcus radiotolerans 2007 RefSeq
Saccharopolyspora sen Saccharopolyspora erythraea 2007 RefSeq
Saccharomonospora svi Saccharomonospora viridis 2009 RefSeq
Thermobispora tbi Thermobispora bispora 2010 RefSeq
Amycolatopsis amd Amycolatopsis mediterranei 2010 RefSeq
Actinosynnema ami Actinosynnema mirum 2009 RefSeq
Salinispora stp Salinispora tropica 2007 RefSeq
saq Salinispora arenicola 2007 RefSeq
Micromonospora mau Micromonospora aurantiaca 2010 RefSeq
Catenulispora cai Catenulispora acidiphila 2009 RefSeq
Stackebrandtia sna Stackebrandtia nassauensis 2010 RefSeq
Arcanobacterium ahe Arcanobacterium haemolyticum 2010 RefSeq
Mobiluncus mcu Mobiluncus curtisii 2010 RefSeq
Bifidobacterium blo Bifidobacterium longum NCC2705 2002 RefSeq
blj Bifidobacterium longum DJO10A 2008 RefSeq
bln Bifidobacterium longum subsp. infantis ATCC 15697 2008 RefSeq
bll Bifidobacterium longum subsp. longum JDM301 2010 RefSeq
bad Bifidobacterium adolescentis 2006 RefSeq
bla Bifidobacterium animalis subsp. lactis AD011 2009 RefSeq
blc Bifidobacterium animalis subsp. lactis Bl-04 2009 RefSeq
blt Bifidobacterium animalis subsp. lactis DSM 10140 2009 RefSeq
bde Bifidobacterium dentium 2010 RefSeq
Gardnerella gva Gardnerella vaginalis 2010 RefSeq
Rubrobacter rxy Rubrobacter xylanophilus 2006 RefSeq
Conexibacter cwo Conexibacter woesei 2010 RefSeq
Acidimicrobium afo Acidimicrobium ferrooxidans DSM 10331 2009 RefSeq
Cryptobacterium ccu Cryptobacterium curtum 2009 RefSeq
Slackia shi Slackia heliotrinireducens 2009 RefSeq
Atopobium apv Atopobium parvulum 2009 RefSeq
Eggerthella ele Eggerthella lenta 2009 RefSeq
Olsenella ols Olsenella uli 2010 RefSeq
Chlamydiae Chlamydia ctr Chlamydia trachomatis D/UW-3/CX (serovar D) 1998 RefSeq
cta Chlamydia trachomatis A/HAR-13 (serovar A) 2005 RefSeq
ctb Chlamydia trachomatis 434/Bu 2008 RefSeq
ctl Chlamydia trachomatis L2b/UCH-1/proctitis 2008 RefSeq
ctj Chlamydia trachomatis B/Jali20/OT 2009 RefSeq
cmu Chlamydia muridarum 2000 RefSeq
Chlamydophila cpn Chlamydophila pneumoniae CWL029 1999 RefSeq
cpa Chlamydophila pneumoniae AR39 2000 RefSeq
cpj Chlamydophila pneumoniae J138 2000 RefSeq
cpt Chlamydophila pneumoniae TW183 2003 RefSeq
cca Chlamydophila caviae 2003 RefSeq
cab Chlamydophila abortus 2005 RefSeq
cfe Chlamydophila felis 2006 RefSeq
Protochlamydia pcu Candidatus Protochlamydia amoebophila 2004 RefSeq
Waddlia wch Waddlia chondrophila 2010 RefSeq
Spirochaetes Borrelia bbu Borrelia burgdorferi B31 1997 RefSeq
bbz Borrelia burgdorferi ZS7 2008 RefSeq
bga Borrelia garinii 2004 RefSeq
baf Borrelia afzelii 2006 RefSeq
btu Borrelia turicatae 2008 RefSeq
bhr Borrelia hermsii 2008 RefSeq
bdu Borrelia duttonii 2008 RefSeq
bre Borrelia recurrentis 2008 RefSeq
Treponema tpa Treponema pallidum subsp. pallidum Nichols 1998 RefSeq
tpp Treponema pallidum subsp. pallidum SS14 2008 RefSeq
tde Treponema denticola 2004 RefSeq
Spirochaeta ssm Spirochaeta smaragdinae 2010 RefSeq
Leptospira lil Leptospira interrogans serovar lai 2002 RefSeq
lic Leptospira interrogans serovar Copenhageni 2004 RefSeq
lbj Leptospira borgpetersenii JB197 2006 RefSeq
lbl Leptospira borgpetersenii L550 2006 RefSeq
lbi Leptospira biflexa serovar Patoc Patoc 1 (Paris) 2008 RefSeq
lbf Leptospira biflexa serovar Patoc Patoc 1 (Ames) 2008 RefSeq
Brachyspira bhy Brachyspira hyodysenteriae 2009 RefSeq
brm Brachyspira murdochii 2010 RefSeq
bpo Brachyspira pilosicoli 2010 RefSeq
Acidobacteria Koribacter aba Acidobacteria bacterium 2006 RefSeq
Acidobacterium aca Acidobacterium capsulatum 2009 RefSeq
Solibacter sus Solibacter usitatus 2006 RefSeq
Bacteroidetes Bacteroides bth Bacteroides thetaiotaomicron 2003 RefSeq
bfr Bacteroides fragilis YCH46 2004 RefSeq
bfs Bacteroides fragilis NCTC9343 2005 RefSeq
bvu Bacteroides vulgatus 2007 RefSeq
Porphyromonas pgi Porphyromonas gingivalis W83 2003 RefSeq
pgn Porphyromonas gingivalis ATCC 33277 2008 RefSeq
Parabacteroides pdi Parabacteroides distasonis 2007 RefSeq
Azobacteroides aps Candidatus Azobacteroides pseudotrichonymphae 2008 RefSeq
Prevotella pru Prevotella ruminicola 2010 RefSeq
pmz Prevotella melaninogenica 2010 RefSeq
Salinibacter sru Salinibacter ruber 2005 RefSeq
srm Salinibacter ruber 2010 RefSeq
Rhodothermus rmr Rhodothermus marinus 2009 RefSeq
Cytophaga chu Cytophaga hutchinsonii 2006 RefSeq
Dyadobacter dfe Dyadobacter fermentans 2009 RefSeq
Spirosoma sli Spirosoma linguale 2010 RefSeq
Chitinophaga cpi Chitinophaga pinensis 2009 RefSeq
Pedobacter phe Pedobacter heparinus 2009 RefSeq
Gramella gfo Gramella forsetii 2006 RefSeq
Flavobacterium fjo Flavobacterium johnsoniae 2007 RefSeq
fps Flavobacterium psychrophilum 2007 RefSeq
fba Flavobacteriaceae bacterium 2009 RefSeq
Capnocytophaga coc Capnocytophaga ochracea 2009 RefSeq
Robiginitalea rbi Robiginitalea biformata 2009 RefSeq
Zunongwangia zpr Zunongwangia profunda 2010 RefSeq
Croceibacter cat Croceibacter atlanticus 2010 RefSeq
Sulcia smg Candidatus Sulcia muelleri GWSS 2007 RefSeq
sms Candidatus Sulcia muelleri SMDSEM 2009 RefSeq
smh Candidatus Sulcia muelleri DMIN 2010 RefSeq
Blattabacterium bbl Blattabacterium sp. (Blattella germanica) 2009 RefSeq
bpi Blattabacterium sp. (Periplaneta americana) 2009 RefSeq
Amoebophilus aas Candidatus Amoebophilus asiaticus 2008 RefSeq
Fibrobacteres Fibrobacter fsu Fibrobacter succinogenes 2009 RefSeq
Fusobacteria Fusobacterium fnu Fusobacterium nucleatum 2002 RefSeq
Leptotrichia lba Leptotrichia buccalis 2009 RefSeq
Sebaldella str Sebaldella termitidis 2009 RefSeq
Streptobacillus smf Streptobacillus moniliformis 2009 RefSeq
Verrucomicrobia Opitutus ote Opitutus terrae 2008 RefSeq
Coraliomargarita caa Coraliomargarita akajimensis 2010 RefSeq
Methylacidiphilum min Methylacidiphilum infernorum 2008 RefSeq
Akkermansia amu Akkermansia muciniphila 2008 RefSeq
Gemmatimonadetes Gemmatimonas gau Gemmatimonas aurantiaca 2009 RefSeq
Planctomycetes Rhodopirellula rba Rhodopirellula baltica 2003 RefSeq
Pirellula psl Pirellula staleyi 2010 RefSeq
Planctomyces plm Planctomyces limnophilus 2010 RefSeq
Elusimicrobia Elusimicrobium emi Elusimicrobium minutum 2008 RefSeq
Termite group 1 rsd Uncultured Termite group 1 bacterium phylotype Rs-D17 2008 RefSeq
Synergistetes Thermanaerovibrio tai Thermanaerovibrio acidaminovorans 2009 RefSeq
Aminobacterium aco Aminobacterium colombiense 2010 RefSeq
Cyanobacteria Synechocystis syn Synechocystis sp. PCC6803 1996 RefSeq
Synechococcus syw Synechococcus sp. WH8102 2003 RefSeq
syc Synechococcus elongatus PCC6301 2004 RefSeq
syf Synechococcus elongatus PCC7942 2005 RefSeq
syd Synechococcus sp. CC9605 2005 RefSeq
sye Synechococcus sp. CC9902 2005 RefSeq
syg Synechococcus sp. CC9311 2006 RefSeq
syr Synechococcus sp. RCC307 2007 RefSeq
syx Synechococcus sp. WH7803 2007 RefSeq
syp Synechococcus sp. PCC7002 2008 RefSeq
cya Cyanobacteria Yellowstone A-Prime 2006 RefSeq
cyb Cyanobacteria Yellowstone B-Prime 2006 RefSeq
Thermosynechococcus tel Thermosynechococcus elongatus 2002 RefSeq
Microcystis mar Microcystis aeruginosa 2008 RefSeq
Cyanothece cyt Cyanothece sp. ATCC 51142 2008 RefSeq
cyp Cyanothece sp. PCC 8801 2008 RefSeq
cyc Cyanothece sp. PCC 7424 2008 RefSeq
cyn Cyanothece sp. PCC 7425 2009 RefSeq
cyh Cyanothece sp. PCC 8802 2009 RefSeq
Unclassified Chroococcales cyu Cyanobacterium UCYN-A 2010 RefSeq
Gloeobacter gvi Gloeobacter violaceus 2003 RefSeq
Nostoc ana Anabaena sp. PCC7120 2001 RefSeq
npu Nostoc punctiforme 2008 RefSeq
ava Anabaena variabilis 2005 RefSeq
naz Anabaena azollae 0708 2010 RefSeq
Prochlorococcus pma Prochlorococcus marinus SS120 2003 RefSeq
pmm Prochlorococcus marinus MED4 2003 RefSeq
pmt Prochlorococcus marinus MIT 9313 2003 RefSeq
pmn Prochlorococcus marinus NATL2A 2005 RefSeq
pmi Prochlorococcus marinus MIT9312 2005 RefSeq
pmb Prochlorococcus marinus AS9601 2007 RefSeq
pmc Prochlorococcus marinus MIT 9515 2007 RefSeq
pmf Prochlorococcus marinus MIT 9303 2007 RefSeq
pmg Prochlorococcus marinus MIT 9301 2007 RefSeq
pmh Prochlorococcus marinus MIT 9215 2007 RefSeq
pmj Prochlorococcus marinus MIT 9211 2007 RefSeq
pme Prochlorococcus marinus NATL1A 2007 RefSeq
Trichodesmium ter Trichodesmium erythraeum 2006 RefSeq
Acaryochloris amr Acaryochloris marina 2007 RefSeq
Green sulfur bacteria Chlorobaculum cte Chlorobaculum tepidum 2002 RefSeq
cpc Chlorobaculum parvum NCIB 8327 2008 RefSeq
Chlorobium cch Chlorobium chlorochromatii 2005 RefSeq
cph Chlorobium phaeobacteroides DSM 266 2006 RefSeq
cpb Chlorobium phaeobacteroides BS1 2008 RefSeq
cli Chlorobium limicola 2008 RefSeq
pvi Chlorobium vibrioformis 2007 RefSeq
Pelodictyon plt Pelodictyon luteolum 2005 RefSeq
pph Pelodictyon phaeoclathratiforme 2008 RefSeq
Prosthecochloris paa Prosthecochloris aestuarii 2008 RefSeq
Chloroherpeton cts Chloroherpeton thalassium 2008 RefSeq
Green nonsulfur bacteria Dehalococcoides det Dehalococcoides ethenogenes 2005 RefSeq
deh Dehalococcoides sp. CBDB1 2005 RefSeq
deb Dehalococcoides sp. BAV1 2007 RefSeq
dev Dehalococcoides sp. VS 2009 RefSeq
deg Dehalococcoides sp. GT 2010 RefSeq
Dehalogenimonas dly Dehalogenimonas lykanthroporepellens 2010 RefSeq
Roseiflexus rrs Roseiflexus sp. RS-1 2007 RefSeq
rca Roseiflexus castenholzii DSM13941 2007 RefSeq
Chloroflexus cau Chloroflexus aurantiacus 2007 RefSeq
cag Chloroflexus aggregans 2009 RefSeq
chl Chloroflexus sp. Y-400-fl 2009 RefSeq
Herpetosiphon hau Herpetosiphon aurantiacus 2007 RefSeq
Thermomicrobium tro Thermomicrobium roseum 2009 RefSeq
Sphaerobacterineae sti Sphaerobacter thermophilus 2009 RefSeq
Deinococcus-Thermus Deinococcus dra Deinococcus radiodurans 1999 RefSeq
dge Deinococcus geothermalis 2006 RefSeq
ddr Deinococcus deserti 2009 RefSeq
Truepera tra Truepera radiovictrix 2010 RefSeq
Thermus tth Thermus thermophilus HB27 2004 RefSeq
ttj Thermus thermophilus HB8 2004 RefSeq
Meiothermus mrb Meiothermus ruber 2010 RefSeq
msv Meiothermus silvanus 2010 RefSeq
Hyperthermophilic bacteria Aquifex aae Aquifex aeolicus 1998 RefSeq
Hydrogenobaculum hya Hydrogenobaculum sp. Y04AAS1 2008 RefSeq
Hydrogenobacter hth Hydrogenobacter thermophilus 2010 RefSeq
Thermocrinis tal Thermocrinis albus 2010 RefSeq
Sulfurihydrogenibium sul Sulfurihydrogenibium sp. YO3AOP1 2008 RefSeq
saf Sulfurihydrogenibium azorense 2009 RefSeq
Persephonella pmx Persephonella marina 2009 RefSeq
Thermotoga tma Thermotoga maritima 1999 RefSeq
tpt Thermotoga petrophila 2007 RefSeq
tle Thermotoga lettingae 2007 RefSeq
trq Thermotoga sp. RQ2 2008 RefSeq
tna Thermotoga neapolitana 2009 RefSeq
tnp Thermotoga naphthophila 2009 RefSeq
Thermosipho tme Thermosipho melanesiensis 2007 RefSeq
taf Thermosipho africanus 2008 RefSeq
Fervidobacterium fno Fervidobacterium nodosum 2007 RefSeq
Petrotoga pmo Petrotoga mobilis 2007 RefSeq
Kosmotoga kol Kosmotoga olearia 2009 RefSeq
Dictyoglomus dth Dictyoglomus thermophilum 2008 RefSeq
dtu Dictyoglomus turgidum 2008 RefSeq
Thermodesulfovibrio tye Thermodesulfovibrio yellowstonii 2008 RefSeq
Nitrospira nde Candidatus Nitrospira defluvii 2010 RefSeq
Thermobaculum ttr Thermobaculum terrenum 2009 RefSeq
Deferribacter ddf Deferribacter desulfuricans SSM1 2010 RefSeq
Denitrovibrio dap Denitrovibrio acetiphilus 2010 RefSeq
Archaea Euryarchaeota Methanocaldococcus mja Methanocaldococcus jannaschii 1996 RefSeq
mfe Methanocaldococcus fervens 2009 RefSeq
mvu Methanocaldococcus vulcanius 2009 RefSeq
mfs Methanocaldococcus sp. FS406-22 2010 RefSeq
mif Methanocaldococcus infernus 2010 RefSeq
Methanococcus mmp Methanococcus maripaludis S2 2004 RefSeq
mmq Methanococcus maripaludis C5 2007 RefSeq
mmx Methanococcus maripaludis C6 2007 RefSeq
mmz Methanococcus maripaludis C7 2007 RefSeq
mae Methanococcus aeolicus 2007 RefSeq
mvn Methanococcus vannielii 2007 RefSeq
mvo Methanococcus voltae 2010 RefSeq
Methanosarcina mac Methanosarcina acetivorans 2002 RefSeq
mba Methanosarcina barkeri 2005 RefSeq
mma Methanosarcina mazei 2002 RefSeq
Methanococcoides mbu Methanococcoides burtonii 2006 RefSeq
Methanohalophilus mmh Methanohalophilus mahii 2010 RefSeq
Methanohalobium mev Methanohalobium evestigatum 2010 RefSeq
Methanosaeta mtp Methanosaeta thermophila 2006 RefSeq
Methanospirillum mhu Methanospirillum hungatei 2006 RefSeq
Methanocorpusculum mla Methanocorpusculum labreanum 2007 RefSeq
Methanoculleus mem Methanoculleus marisnigri 2007 RefSeq
Methanoregula mbn Candidatus Methanoregula boonei 2007 RefSeq
Methanosphaerula mpl Candidatus Methanosphaerula palustris 2009 RefSeq
Methanocella mpd Methanocella paludicola 2010 RefSeq
Methanobacterium mth Methanothermobacter thermautotrophicus 1997 RefSeq
mmg Methanothermobacter marburgensis 2010 RefSeq
Methanosphaera mst Methanosphaera stadtmanae 2006 RefSeq
Methanobrevibacter msi Methanobrevibacter smithii ATCC 35061 2007 RefSeq
mru Methanobrevibacter ruminantium 2010 RefSeq
Methanopyrus mka Methanopyrus kandleri 2002 RefSeq
Archaeoglobus afu Archaeoglobus fulgidus 1997 RefSeq
apo Archaeoglobus profundus 2010 RefSeq
Ferroglobus fpl Ferroglobus placidus 2010 RefSeq
Halobacterium hal Halobacterium sp. NRC-1 2000 RefSeq
hsl Halobacterium salinarum R1 2008 RefSeq
Haloarcula hma Haloarcula marismortui 2004 RefSeq
Haloquadratum hwa Haloquadratum walsbyi 2006 RefSeq
Natronomonas nph Natronomonas pharaonis 2005 RefSeq
Halorubrum hla Halorubrum lacusprofundi 2009 RefSeq
Halorhabdus hut Halorhabdus utahensis 2009 RefSeq
Halomicrobium hmu Halomicrobium mukohataei 2009 RefSeq
Haloterrigena htu Haloterrigena turkmenica 2010 RefSeq
Natrialba nmg Natrialba magadii 2010 RefSeq
Haloferax hvo Haloferax volcanii 2010 RefSeq
Halalkalicoccus hje Halalkalicoccus jeotgali 2010 RefSeq
Thermoplasma tac Thermoplasma acidophilum 2000 RefSeq
tvo Thermoplasma volcanium 2000 RefSeq
Picrophilus pto Picrophilus torridus 2004 RefSeq
Pyrococcus pho Pyrococcus horikoshii 1998 RefSeq
pab Pyrococcus abyssi 1999 RefSeq
pfu Pyrococcus furiosus 2002 RefSeq
Thermococcus tko Thermococcus kodakaraensis 2005 RefSeq
ton Thermococcus onnurineus 2008 RefSeq
tga Thermococcus gammatolerans 2009 RefSeq
tsi Thermococcus sibiricus 2009 RefSeq
Aciduliprofundum abi Aciduliprofundum boonei 2010 RefSeq
Rice Cluster I rci Uncultured methanogenic archaeon RC-I 2007 RefSeq
Crenarchaeota Aeropyrum ape Aeropyrum pernix 1999 RefSeq
Staphylothermus smr Staphylothermus marinus 2007 RefSeq
shc Staphylothermus hellenicus 2010 RefSeq
Ignicoccus iho Ignicoccus hospitalis 2007 RefSeq
Desulfurococcus dka Desulfurococcus kamchatkensis 2009 RefSeq
Thermosphaera tag Thermosphaera aggregans 2010 RefSeq
Hyperthermus hbu Hyperthermus butylicus 2007 RefSeq
Sulfolobus sso Sulfolobus solfataricus 2001 RefSeq
sto Sulfolobus tokodaii 2001 RefSeq
sai Sulfolobus acidocaldarius 2005 RefSeq
sis Sulfolobus islandicus L.S.2.15 2009 RefSeq
sia Sulfolobus islandicus M.14.25 2009 RefSeq
sim Sulfolobus islandicus M.16.27 2009 RefSeq
sid Sulfolobus islandicus M.16.4 2009 RefSeq
siy Sulfolobus islandicus Y.G.57.14 2009 RefSeq
sin Sulfolobus islandicus Y.N.15.51 2009 RefSeq
sii Sulfolobus islandicus L.D.8.5 2010 RefSeq
Metallosphaera mse Metallosphaera sedula 2007 RefSeq
Pyrobaculum pai Pyrobaculum aerophilum 2002 RefSeq
pis Pyrobaculum islandicum 2006 RefSeq
pcl Pyrobaculum calidifontis 2007 RefSeq
pas Pyrobaculum arsenaticum 2007 RefSeq
Caldivirga cma Caldivirga maquilingensis 2007 RefSeq
Thermoproteus tne Thermoproteus neutrophilus 2008 RefSeq
Thermofilum tpe Thermofilum pendens 2006 RefSeq
Acidilobus asc Acidilobus saccharovorans 2010 RefSeq
Thaumarchaeota Nitrosopumilus nmr Nitrosopumilus maritimus 2007 RefSeq
Nanoarchaeota Nanoarchaeum neq Nanoarchaeum equitans 2003 RefSeq
Korarchaeota Korarchaeum kcr Candidatus Korarchaeum cryptofilum 2008 RefSeq

Last updated: September 3, 2010

[ KEGG2 | GENOME | KEGG ]